==335135== Memcheck, a memory error detector ==335135== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==335135== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==335135== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVanLeeuwen2009WntSwatCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==335135== Parent PID: 314941 ==335135== ==335135== ==335135== FILE DESCRIPTORS: 9 open (3 std) at exit. ==335135== Open file descriptor 12: ==335135== at 0x11BF822D: pipe (pipe.c:29) ==335135== by 0x1A7C407D: ??? ==335135== by 0x159794CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==335135== by 0x11504418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==335135== by 0x1149DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==335135== by 0x10192D38: PetscInitialize (pinit.c:924) ==335135== by 0x1000469F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==335135== by 0x100046ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==335135== by 0x140495: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==335135== by 0x13965F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==335135== by 0x13C5E4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==335135== by 0x13C484: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==335135== by 0x13CB1B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==335135== by 0x137990: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==335135== ==335135== Open file descriptor 8: /dev/shm/open_mpi.0000 ==335135== at 0x11BFCBCC: __open_nocancel (open64_nocancel.c:39) ==335135== by 0x11B80C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==335135== by 0x1003C822: ??? ==335135== by 0x1003C96F: ??? ==335135== by 0x15A1E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==335135== by 0x15A1E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==335135== by 0x159D4922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==335135== by 0x159792DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==335135== by 0x11504418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==335135== by 0x1149DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==335135== by 0x10192D38: PetscInitialize (pinit.c:924) ==335135== by 0x1000469F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==335135== by 0x100046ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==335135== by 0x140495: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==335135== by 0x13965F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==335135== by 0x13C5E4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==335135== by 0x13C484: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==335135== by 0x13CB1B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==335135== by 0x137990: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==335135== ==335135== Open file descriptor 116: ==335135== ==335135== ==335135== Open file descriptor 112: ==335135== ==335135== ==335135== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVanLeeuwen2009WntSwatCellCycleOdeSystem_valgrind.txt ==335135== ==335135== ==335135== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==335135== ==335135== ==335135== ==335135== HEAP SUMMARY: ==335135== in use at exit: 700,754 bytes in 9,377 blocks ==335135== total heap usage: 520,952 allocs, 511,575 frees, 1,562,080,884 bytes allocated ==335135== ==335135== LEAK SUMMARY: ==335135== definitely lost: 0 bytes in 0 blocks ==335135== indirectly lost: 0 bytes in 0 blocks ==335135== possibly lost: 0 bytes in 0 blocks ==335135== still reachable: 24 bytes in 2 blocks ==335135== suppressed: 700,730 bytes in 9,375 blocks ==335135== Reachable blocks (those to which a pointer was found) are not shown. ==335135== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==335135== ==335135== For lists of detected and suppressed errors, rerun with: -s ==335135== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)