==445579== Memcheck, a memory error detector ==445579== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==445579== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==445579== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==445579== Parent PID: 443847 ==445579== ==445579== ==445579== FILE DESCRIPTORS: 9 open (3 std) at exit. ==445579== Open file descriptor 12: ==445579== at 0xECCE22D: pipe (pipe.c:29) ==445579== by 0x18AF107D: ??? ==445579== by 0x140F24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==445579== by 0x108B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==445579== by 0x10852D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==445579== by 0xF547D38: PetscInitialize (pinit.c:924) ==445579== by 0xE58F69F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==445579== by 0xE58F6ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==445579== by 0x2EC050: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==445579== by 0x2E12B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==445579== by 0x2E5C7C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==445579== by 0x2E5B1C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==445579== by 0x2E61B3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==445579== by 0x2DF5A0: main (TestNodeBasedCellPopulation.cpp:19) ==445579== ==445579== Open file descriptor 8: /dev/shm/open_mpi.0000 ==445579== at 0xECD2BCC: __open_nocancel (open64_nocancel.c:39) ==445579== by 0xEC56C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==445579== by 0xE5C7822: ??? ==445579== by 0xE5C796F: ??? ==445579== by 0x141976DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==445579== by 0x14197938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==445579== by 0x1414D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==445579== by 0x140F22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==445579== by 0x108B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==445579== by 0x10852D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==445579== by 0xF547D38: PetscInitialize (pinit.c:924) ==445579== by 0xE58F69F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==445579== by 0xE58F6ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==445579== by 0x2EC050: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==445579== by 0x2E12B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==445579== by 0x2E5C7C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==445579== by 0x2E5B1C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==445579== by 0x2E61B3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==445579== by 0x2DF5A0: main (TestNodeBasedCellPopulation.cpp:19) ==445579== ==445579== Open file descriptor 116: ==445579== ==445579== ==445579== Open file descriptor 112: ==445579== ==445579== ==445579== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==445579== ==445579== ==445579== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==445579== ==445579== ==445579== ==445579== HEAP SUMMARY: ==445579== in use at exit: 700,702 bytes in 9,374 blocks ==445579== total heap usage: 20,194,181 allocs, 20,184,807 frees, 2,577,937,721 bytes allocated ==445579== ==445579== LEAK SUMMARY: ==445579== definitely lost: 0 bytes in 0 blocks ==445579== indirectly lost: 0 bytes in 0 blocks ==445579== possibly lost: 0 bytes in 0 blocks ==445579== still reachable: 56 bytes in 3 blocks ==445579== suppressed: 700,646 bytes in 9,371 blocks ==445579== Reachable blocks (those to which a pointer was found) are not shown. ==445579== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==445579== ==445579== For lists of detected and suppressed errors, rerun with: -s ==445579== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)