==445628== Memcheck, a memory error detector ==445628== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==445628== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==445628== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPeriodicNodeBasedCellPopulationParallelMethods -malloc_debug -malloc_dump -memory_info ==445628== Parent PID: 443847 ==445628== ==445628== ==445628== FILE DESCRIPTORS: 9 open (3 std) at exit. ==445628== Open file descriptor 12: ==445628== at 0xECD222D: pipe (pipe.c:29) ==445628== by 0x18AF107D: ??? ==445628== by 0x140F24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==445628== by 0x109A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==445628== by 0x10939D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==445628== by 0xF630D38: PetscInitialize (pinit.c:924) ==445628== by 0xE4F069F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==445628== by 0xE4F06ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==445628== by 0x134DFE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==445628== by 0x12E89D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==445628== by 0x13107E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==445628== by 0x130F7A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==445628== by 0x13158D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==445628== by 0x12D0A0: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==445628== ==445628== Open file descriptor 8: /dev/shm/open_mpi.0000 ==445628== at 0xECD6BCC: __open_nocancel (open64_nocancel.c:39) ==445628== by 0xEC5AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==445628== by 0xE528822: ??? ==445628== by 0xE52896F: ??? ==445628== by 0x141976DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==445628== by 0x14197938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==445628== by 0x1414D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==445628== by 0x140F22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==445628== by 0x109A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==445628== by 0x10939D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==445628== by 0xF630D38: PetscInitialize (pinit.c:924) ==445628== by 0xE4F069F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==445628== by 0xE4F06ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==445628== by 0x134DFE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==445628== by 0x12E89D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==445628== by 0x13107E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==445628== by 0x130F7A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==445628== by 0x13158D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==445628== by 0x12D0A0: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==445628== ==445628== Open file descriptor 116: ==445628== ==445628== ==445628== Open file descriptor 112: ==445628== ==445628== ==445628== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPeriodicNodeBasedCellPopulationParallelMethods_valgrind.txt ==445628== ==445628== ==445628== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==445628== ==445628== ==445628== ==445628== HEAP SUMMARY: ==445628== in use at exit: 700,770 bytes in 9,378 blocks ==445628== total heap usage: 54,852 allocs, 45,474 frees, 1,353,935,917 bytes allocated ==445628== ==445628== LEAK SUMMARY: ==445628== definitely lost: 0 bytes in 0 blocks ==445628== indirectly lost: 0 bytes in 0 blocks ==445628== possibly lost: 0 bytes in 0 blocks ==445628== still reachable: 56 bytes in 3 blocks ==445628== suppressed: 700,714 bytes in 9,375 blocks ==445628== Reachable blocks (those to which a pointer was found) are not shown. ==445628== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==445628== ==445628== For lists of detected and suppressed errors, rerun with: -s ==445628== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)