==462079== Memcheck, a memory error detector ==462079== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==462079== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==462079== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningPottsBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==462079== Parent PID: 443847 ==462079== ==462079== ==462079== FILE DESCRIPTORS: 9 open (3 std) at exit. ==462079== Open file descriptor 12: ==462079== at 0xD32522D: pipe (pipe.c:29) ==462079== by 0x18AF107D: ??? ==462079== by 0x140F24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==462079== by 0x108B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==462079== by 0x10852D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==462079== by 0xF549D38: PetscInitialize (pinit.c:924) ==462079== by 0xCC2869F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==462079== by 0xCC286ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==462079== by 0x12CC8A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==462079== by 0x127FCF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==462079== by 0x12A7C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==462079== by 0x12A665: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==462079== by 0x12ACFB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==462079== by 0x126300: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==462079== ==462079== Open file descriptor 8: /dev/shm/open_mpi.0000 ==462079== at 0xD329BCC: __open_nocancel (open64_nocancel.c:39) ==462079== by 0xD2ADC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==462079== by 0xCC60822: ??? ==462079== by 0xCC6096F: ??? ==462079== by 0x141976DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==462079== by 0x14197938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==462079== by 0x1414D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==462079== by 0x140F22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==462079== by 0x108B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==462079== by 0x10852D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==462079== by 0xF549D38: PetscInitialize (pinit.c:924) ==462079== by 0xCC2869F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==462079== by 0xCC286ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==462079== by 0x12CC8A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==462079== by 0x127FCF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==462079== by 0x12A7C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==462079== by 0x12A665: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==462079== by 0x12ACFB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==462079== by 0x126300: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==462079== ==462079== Open file descriptor 116: ==462079== ==462079== ==462079== Open file descriptor 112: ==462079== ==462079== ==462079== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningPottsBasedSimulationsTutorial_valgrind.txt ==462079== ==462079== ==462079== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==462079== ==462079== ==462079== ==462079== HEAP SUMMARY: ==462079== in use at exit: 700,702 bytes in 9,374 blocks ==462079== total heap usage: 40,686,683 allocs, 40,677,309 frees, 3,844,680,642 bytes allocated ==462079== ==462079== LEAK SUMMARY: ==462079== definitely lost: 0 bytes in 0 blocks ==462079== indirectly lost: 0 bytes in 0 blocks ==462079== possibly lost: 0 bytes in 0 blocks ==462079== still reachable: 56 bytes in 3 blocks ==462079== suppressed: 700,646 bytes in 9,371 blocks ==462079== Reachable blocks (those to which a pointer was found) are not shown. ==462079== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==462079== ==462079== For lists of detected and suppressed errors, rerun with: -s ==462079== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)