==514993== Memcheck, a memory error detector ==514993== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==514993== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==514993== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellMutationStateTutorial -malloc_debug -malloc_dump -memory_info ==514993== Parent PID: 504971 ==514993== ==514993== ==514993== FILE DESCRIPTORS: 9 open (3 std) at exit. ==514993== Open file descriptor 12: ==514993== at 0x100E422D: pipe (pipe.c:29) ==514993== by 0x18AEF07D: ??? ==514993== by 0x140544CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==514993== by 0xF9EE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==514993== by 0xF987D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==514993== by 0xE67ED38: PetscInitialize (pinit.c:924) ==514993== by 0xE4F069F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==514993== by 0xE4F06ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==514993== by 0x1543A7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==514993== by 0x14D633: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==514993== by 0x150502: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==514993== by 0x1503A2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==514993== by 0x150A39: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==514993== by 0x14B920: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==514993== ==514993== Open file descriptor 8: /dev/shm/open_mpi.0000 ==514993== at 0x100E8BCC: __open_nocancel (open64_nocancel.c:39) ==514993== by 0x1006CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==514993== by 0xE528822: ??? ==514993== by 0xE52896F: ??? ==514993== by 0x140F96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==514993== by 0x140F9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==514993== by 0x140AF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==514993== by 0x140542DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==514993== by 0xF9EE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==514993== by 0xF987D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==514993== by 0xE67ED38: PetscInitialize (pinit.c:924) ==514993== by 0xE4F069F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==514993== by 0xE4F06ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==514993== by 0x1543A7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==514993== by 0x14D633: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==514993== by 0x150502: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==514993== by 0x1503A2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==514993== by 0x150A39: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==514993== by 0x14B920: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==514993== ==514993== Open file descriptor 116: ==514993== ==514993== ==514993== Open file descriptor 112: ==514993== ==514993== ==514993== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellMutationStateTutorial_valgrind.txt ==514993== ==514993== ==514993== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==514993== ==514993== ==514993== ==514993== HEAP SUMMARY: ==514993== in use at exit: 700,702 bytes in 9,374 blocks ==514993== total heap usage: 4,263,739 allocs, 4,254,365 frees, 1,913,205,221 bytes allocated ==514993== ==514993== LEAK SUMMARY: ==514993== definitely lost: 0 bytes in 0 blocks ==514993== indirectly lost: 0 bytes in 0 blocks ==514993== possibly lost: 0 bytes in 0 blocks ==514993== still reachable: 56 bytes in 3 blocks ==514993== suppressed: 700,646 bytes in 9,371 blocks ==514993== Reachable blocks (those to which a pointer was found) are not shown. ==514993== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==514993== ==514993== For lists of detected and suppressed errors, rerun with: -s ==514993== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)