==512370== Memcheck, a memory error detector ==512370== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==512370== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==512370== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==512370== Parent PID: 504971 ==512370== ==512370== ==512370== FILE DESCRIPTORS: 9 open (3 std) at exit. ==512370== Open file descriptor 12: ==512370== at 0xED1622D: pipe (pipe.c:29) ==512370== by 0x18AF107D: ??? ==512370== by 0x140F24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==512370== by 0x109A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512370== by 0x10939D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512370== by 0xF630D38: PetscInitialize (pinit.c:924) ==512370== by 0xE4F069F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==512370== by 0xE4F06ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==512370== by 0x1E1234: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==512370== by 0x1D7453: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==512370== by 0x1DAE3E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==512370== by 0x1DACDE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==512370== by 0x1DB375: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==512370== by 0x1D5740: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==512370== ==512370== Open file descriptor 8: /dev/shm/open_mpi.0000 ==512370== at 0xED1ABCC: __open_nocancel (open64_nocancel.c:39) ==512370== by 0xEC9EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==512370== by 0xE528822: ??? ==512370== by 0xE52896F: ??? ==512370== by 0x141976DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==512370== by 0x14197938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==512370== by 0x1414D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==512370== by 0x140F22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==512370== by 0x109A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512370== by 0x10939D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512370== by 0xF630D38: PetscInitialize (pinit.c:924) ==512370== by 0xE4F069F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==512370== by 0xE4F06ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==512370== by 0x1E1234: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==512370== by 0x1D7453: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==512370== by 0x1DAE3E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==512370== by 0x1DACDE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==512370== by 0x1DB375: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==512370== by 0x1D5740: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==512370== ==512370== Open file descriptor 116: ==512370== ==512370== ==512370== Open file descriptor 112: ==512370== ==512370== ==512370== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPottsBasedCellPopulation_valgrind.txt ==512370== ==512370== ==512370== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==512370== ==512370== ==512370== ==512370== HEAP SUMMARY: ==512370== in use at exit: 700,718 bytes in 9,375 blocks ==512370== total heap usage: 11,679,305 allocs, 11,669,930 frees, 2,221,804,617 bytes allocated ==512370== ==512370== LEAK SUMMARY: ==512370== definitely lost: 0 bytes in 0 blocks ==512370== indirectly lost: 0 bytes in 0 blocks ==512370== possibly lost: 0 bytes in 0 blocks ==512370== still reachable: 72 bytes in 4 blocks ==512370== suppressed: 700,646 bytes in 9,371 blocks ==512370== Reachable blocks (those to which a pointer was found) are not shown. ==512370== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==512370== ==512370== For lists of detected and suppressed errors, rerun with: -s ==512370== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)