==525404== Memcheck, a memory error detector ==525404== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==525404== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==525404== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVanLeeuwen2009WntSwatCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==525404== Parent PID: 504971 ==525404== ==525404== ==525404== FILE DESCRIPTORS: 9 open (3 std) at exit. ==525404== Open file descriptor 12: ==525404== at 0x11BF822D: pipe (pipe.c:29) ==525404== by 0x1A7C407D: ??? ==525404== by 0x159794CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==525404== by 0x11504418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==525404== by 0x1149DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==525404== by 0x10192D38: PetscInitialize (pinit.c:924) ==525404== by 0x1000469F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==525404== by 0x100046ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==525404== by 0x140495: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==525404== by 0x13965F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==525404== by 0x13C5E4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==525404== by 0x13C484: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==525404== by 0x13CB1B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==525404== by 0x137990: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==525404== ==525404== Open file descriptor 8: /dev/shm/open_mpi.0000 ==525404== at 0x11BFCBCC: __open_nocancel (open64_nocancel.c:39) ==525404== by 0x11B80C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==525404== by 0x1003C822: ??? ==525404== by 0x1003C96F: ??? ==525404== by 0x15A1E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==525404== by 0x15A1E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==525404== by 0x159D4922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==525404== by 0x159792DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==525404== by 0x11504418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==525404== by 0x1149DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==525404== by 0x10192D38: PetscInitialize (pinit.c:924) ==525404== by 0x1000469F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==525404== by 0x100046ED: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==525404== by 0x140495: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==525404== by 0x13965F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==525404== by 0x13C5E4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==525404== by 0x13C484: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==525404== by 0x13CB1B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==525404== by 0x137990: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==525404== ==525404== Open file descriptor 116: ==525404== ==525404== ==525404== Open file descriptor 112: ==525404== ==525404== ==525404== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVanLeeuwen2009WntSwatCellCycleOdeSystem_valgrind.txt ==525404== ==525404== ==525404== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==525404== ==525404== ==525404== ==525404== HEAP SUMMARY: ==525404== in use at exit: 700,754 bytes in 9,377 blocks ==525404== total heap usage: 520,953 allocs, 511,576 frees, 1,562,081,104 bytes allocated ==525404== ==525404== LEAK SUMMARY: ==525404== definitely lost: 0 bytes in 0 blocks ==525404== indirectly lost: 0 bytes in 0 blocks ==525404== possibly lost: 0 bytes in 0 blocks ==525404== still reachable: 24 bytes in 2 blocks ==525404== suppressed: 700,730 bytes in 9,375 blocks ==525404== Reachable blocks (those to which a pointer was found) are not shown. ==525404== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==525404== ==525404== For lists of detected and suppressed errors, rerun with: -s ==525404== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)