==552481== Memcheck, a memory error detector ==552481== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==552481== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==552481== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info ==552481== Parent PID: 550491 ==552481== ==552481== ==552481== FILE DESCRIPTORS: 9 open (3 std) at exit. ==552481== Open file descriptor 12: ==552481== at 0xECD122D: pipe (pipe.c:29) ==552481== by 0x18BE907D: ??? ==552481== by 0x141EC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==552481== by 0x109B1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552481== by 0x1094AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552481== by 0xF641D38: PetscInitialize (pinit.c:924) ==552481== by 0xE5D658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==552481== by 0xE5D65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==552481== by 0x12EA82: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==552481== by 0x128B2F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==552481== by 0x12B0BC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==552481== by 0x12AF5D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==552481== by 0x12B5F3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==552481== by 0x126E60: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==552481== ==552481== Open file descriptor 8: /dev/shm/open_mpi.0000 ==552481== at 0xECD5BCC: __open_nocancel (open64_nocancel.c:39) ==552481== by 0xEC59C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==552481== by 0xE60E822: ??? ==552481== by 0xE60E96F: ??? ==552481== by 0x142916DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==552481== by 0x14291938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==552481== by 0x14247922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==552481== by 0x141EC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==552481== by 0x109B1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552481== by 0x1094AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552481== by 0xF641D38: PetscInitialize (pinit.c:924) ==552481== by 0xE5D658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==552481== by 0xE5D65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==552481== by 0x12EA82: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==552481== by 0x128B2F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==552481== by 0x12B0BC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==552481== by 0x12AF5D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==552481== by 0x12B5F3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==552481== by 0x126E60: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==552481== ==552481== Open file descriptor 112: ==552481== ==552481== ==552481== Open file descriptor 109: ==552481== ==552481== ==552481== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt ==552481== ==552481== ==552481== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==552481== ==552481== ==552481== ==552481== HEAP SUMMARY: ==552481== in use at exit: 700,770 bytes in 9,378 blocks ==552481== total heap usage: 1,125,988 allocs, 1,116,610 frees, 1,430,890,060 bytes allocated ==552481== ==552481== LEAK SUMMARY: ==552481== definitely lost: 0 bytes in 0 blocks ==552481== indirectly lost: 0 bytes in 0 blocks ==552481== possibly lost: 0 bytes in 0 blocks ==552481== still reachable: 56 bytes in 3 blocks ==552481== suppressed: 700,714 bytes in 9,375 blocks ==552481== Reachable blocks (those to which a pointer was found) are not shown. ==552481== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==552481== ==552481== For lists of detected and suppressed errors, rerun with: -s ==552481== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 40 from 40)