==551639== Memcheck, a memory error detector ==551639== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==551639== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==551639== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCell -malloc_debug -malloc_dump -memory_info ==551639== Parent PID: 550491 ==551639== ==551639== ==551639== FILE DESCRIPTORS: 9 open (3 std) at exit. ==551639== Open file descriptor 12: ==551639== at 0xE4FA22D: pipe (pipe.c:29) ==551639== by 0x18BE907D: ??? ==551639== by 0x131384CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==551639== by 0xE14B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==551639== by 0xE0E4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==551639== by 0xCDBBD38: PetscInitialize (pinit.c:924) ==551639== by 0xCC8D58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==551639== by 0xCC8D5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==551639== by 0x1339D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==551639== by 0x12D06F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==551639== by 0x130082: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==551639== by 0x12FF22: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==551639== by 0x1305B9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==551639== by 0x12B3A0: main (TestCell.cpp:19) ==551639== ==551639== Open file descriptor 8: /dev/shm/open_mpi.0000 ==551639== at 0xE4FEBCC: __open_nocancel (open64_nocancel.c:39) ==551639== by 0xE482C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==551639== by 0xE045822: ??? ==551639== by 0xE04596F: ??? ==551639== by 0x131DD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==551639== by 0x131DD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==551639== by 0x13193922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==551639== by 0x131382DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==551639== by 0xE14B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==551639== by 0xE0E4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==551639== by 0xCDBBD38: PetscInitialize (pinit.c:924) ==551639== by 0xCC8D58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==551639== by 0xCC8D5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==551639== by 0x1339D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==551639== by 0x12D06F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==551639== by 0x130082: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==551639== by 0x12FF22: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==551639== by 0x1305B9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==551639== by 0x12B3A0: main (TestCell.cpp:19) ==551639== ==551639== Open file descriptor 112: ==551639== ==551639== ==551639== Open file descriptor 109: ==551639== ==551639== ==551639== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCell_valgrind.txt ==551639== ==551639== ==551639== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==551639== ==551639== ==551639== ==551639== HEAP SUMMARY: ==551639== in use at exit: 700,830 bytes in 9,375 blocks ==551639== total heap usage: 5,185,185 allocs, 5,175,810 frees, 1,834,125,336 bytes allocated ==551639== ==551639== LEAK SUMMARY: ==551639== definitely lost: 0 bytes in 0 blocks ==551639== indirectly lost: 0 bytes in 0 blocks ==551639== possibly lost: 0 bytes in 0 blocks ==551639== still reachable: 184 bytes in 4 blocks ==551639== suppressed: 700,646 bytes in 9,371 blocks ==551639== Reachable blocks (those to which a pointer was found) are not shown. ==551639== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==551639== ==551639== For lists of detected and suppressed errors, rerun with: -s ==551639== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)