==558916== Memcheck, a memory error detector ==558916== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==558916== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==558916== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial -malloc_debug -malloc_dump -memory_info ==558916== Parent PID: 550491 ==558916== ==558916== ==558916== FILE DESCRIPTORS: 9 open (3 std) at exit. ==558916== Open file descriptor 12: ==558916== at 0x101CA22D: pipe (pipe.c:29) ==558916== by 0x18BE707D: ??? ==558916== by 0x1414E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==558916== by 0xFAD4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==558916== by 0xFA6DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==558916== by 0xE764D38: PetscInitialize (pinit.c:924) ==558916== by 0xE5D658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==558916== by 0xE5D65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==558916== by 0x13BDBF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==558916== by 0x135AB1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==558916== by 0x1381A0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==558916== by 0x13809C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==558916== by 0x1386AF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==558916== by 0x134270: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==558916== ==558916== Open file descriptor 8: /dev/shm/open_mpi.0000 ==558916== at 0x101CEBCC: __open_nocancel (open64_nocancel.c:39) ==558916== by 0x10152C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==558916== by 0xE60E822: ??? ==558916== by 0xE60E96F: ??? ==558916== by 0x141F36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==558916== by 0x141F3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==558916== by 0x141A9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==558916== by 0x1414E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==558916== by 0xFAD4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==558916== by 0xFA6DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==558916== by 0xE764D38: PetscInitialize (pinit.c:924) ==558916== by 0xE5D658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==558916== by 0xE5D65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==558916== by 0x13BDBF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==558916== by 0x135AB1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==558916== by 0x1381A0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==558916== by 0x13809C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==558916== by 0x1386AF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==558916== by 0x134270: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==558916== ==558916== Open file descriptor 112: ==558916== ==558916== ==558916== Open file descriptor 109: ==558916== ==558916== ==558916== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial_valgrind.txt ==558916== ==558916== ==558916== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==558916== ==558916== ==558916== ==558916== HEAP SUMMARY: ==558916== in use at exit: 700,770 bytes in 9,378 blocks ==558916== total heap usage: 512,980 allocs, 503,602 frees, 1,665,613,034 bytes allocated ==558916== ==558916== LEAK SUMMARY: ==558916== definitely lost: 0 bytes in 0 blocks ==558916== indirectly lost: 0 bytes in 0 blocks ==558916== possibly lost: 0 bytes in 0 blocks ==558916== still reachable: 56 bytes in 3 blocks ==558916== suppressed: 700,714 bytes in 9,375 blocks ==558916== Reachable blocks (those to which a pointer was found) are not shown. ==558916== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==558916== ==558916== For lists of detected and suppressed errors, rerun with: -s ==558916== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)