==559625== Memcheck, a memory error detector ==559625== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==559625== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==559625== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellCycleModelTutorial -malloc_debug -malloc_dump -memory_info ==559625== Parent PID: 550491 ==559625== ==559625== ==559625== FILE DESCRIPTORS: 9 open (3 std) at exit. ==559625== Open file descriptor 12: ==559625== at 0x102B122D: pipe (pipe.c:29) ==559625== by 0x18BE707D: ??? ==559625== by 0x1414E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==559625== by 0xFAD4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==559625== by 0xFA6DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==559625== by 0xE764D38: PetscInitialize (pinit.c:924) ==559625== by 0xE5D658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==559625== by 0xE5D65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==559625== by 0x230AFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==559625== by 0x228E97: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==559625== by 0x22C882: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==559625== by 0x22C723: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==559625== by 0x22CDB9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==559625== by 0x224C80: main (TestCreatingAndUsingANewCellCycleModelTutorial.cpp:19) ==559625== ==559625== Open file descriptor 8: /dev/shm/open_mpi.0000 ==559625== at 0x102B5BCC: __open_nocancel (open64_nocancel.c:39) ==559625== by 0x10239C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==559625== by 0xE60E822: ??? ==559625== by 0xE60E96F: ??? ==559625== by 0x141F36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==559625== by 0x141F3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==559625== by 0x141A9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==559625== by 0x1414E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==559625== by 0xFAD4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==559625== by 0xFA6DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==559625== by 0xE764D38: PetscInitialize (pinit.c:924) ==559625== by 0xE5D658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==559625== by 0xE5D65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==559625== by 0x230AFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==559625== by 0x228E97: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==559625== by 0x22C882: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==559625== by 0x22C723: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==559625== by 0x22CDB9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==559625== by 0x224C80: main (TestCreatingAndUsingANewCellCycleModelTutorial.cpp:19) ==559625== ==559625== Open file descriptor 112: ==559625== ==559625== ==559625== Open file descriptor 109: ==559625== ==559625== ==559625== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellCycleModelTutorial_valgrind.txt ==559625== ==559625== ==559625== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==559625== ==559625== ==559625== ==559625== HEAP SUMMARY: ==559625== in use at exit: 700,702 bytes in 9,374 blocks ==559625== total heap usage: 8,968,937 allocs, 8,959,563 frees, 2,194,857,474 bytes allocated ==559625== ==559625== LEAK SUMMARY: ==559625== definitely lost: 0 bytes in 0 blocks ==559625== indirectly lost: 0 bytes in 0 blocks ==559625== possibly lost: 0 bytes in 0 blocks ==559625== still reachable: 56 bytes in 3 blocks ==559625== suppressed: 700,646 bytes in 9,371 blocks ==559625== Reachable blocks (those to which a pointer was found) are not shown. ==559625== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==559625== ==559625== For lists of detected and suppressed errors, rerun with: -s ==559625== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)