==563375== Memcheck, a memory error detector ==563375== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==563375== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==563375== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==563375== Parent PID: 550491 ==563375== ==563375== ==563375== FILE DESCRIPTORS: 9 open (3 std) at exit. ==563375== Open file descriptor 12: ==563375== at 0x104FD22D: pipe (pipe.c:29) ==563375== by 0x18BE807D: ??? ==563375== by 0x141A04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==563375== by 0xFD20418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==563375== by 0xFCB9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==563375== by 0xE9B0D38: PetscInitialize (pinit.c:924) ==563375== by 0xE82258B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==563375== by 0xE8225D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==563375== by 0x26C2AD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==563375== by 0x263357: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==563375== by 0x268010: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==563375== by 0x267EB1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==563375== by 0x268547: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==563375== by 0x25EE80: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==563375== ==563375== Open file descriptor 8: /dev/shm/open_mpi.0000 ==563375== at 0x10501BCC: __open_nocancel (open64_nocancel.c:39) ==563375== by 0x10485C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==563375== by 0xE85A822: ??? ==563375== by 0xE85A96F: ??? ==563375== by 0x142456DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==563375== by 0x14245938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==563375== by 0x141FB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==563375== by 0x141A02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==563375== by 0xFD20418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==563375== by 0xFCB9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==563375== by 0xE9B0D38: PetscInitialize (pinit.c:924) ==563375== by 0xE82258B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==563375== by 0xE8225D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==563375== by 0x26C2AD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==563375== by 0x263357: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==563375== by 0x268010: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==563375== by 0x267EB1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==563375== by 0x268547: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==563375== by 0x25EE80: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==563375== ==563375== Open file descriptor 112: ==563375== ==563375== ==563375== Open file descriptor 109: ==563375== ==563375== ==563375== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==563375== ==563375== ==563375== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==563375== ==563375== ==563375== ==563375== HEAP SUMMARY: ==563375== in use at exit: 700,702 bytes in 9,374 blocks ==563375== total heap usage: 3,812,558 allocs, 3,803,184 frees, 1,523,758,505 bytes allocated ==563375== ==563375== LEAK SUMMARY: ==563375== definitely lost: 0 bytes in 0 blocks ==563375== indirectly lost: 0 bytes in 0 blocks ==563375== possibly lost: 0 bytes in 0 blocks ==563375== still reachable: 56 bytes in 3 blocks ==563375== suppressed: 700,646 bytes in 9,371 blocks ==563375== Reachable blocks (those to which a pointer was found) are not shown. ==563375== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==563375== ==563375== For lists of detected and suppressed errors, rerun with: -s ==563375== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)