==570882== Memcheck, a memory error detector ==570882== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==570882== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==570882== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==570882== Parent PID: 550491 ==570882== ==570882== ==570882== FILE DESCRIPTORS: 9 open (3 std) at exit. ==570882== Open file descriptor 12: ==570882== at 0x106DD22D: pipe (pipe.c:29) ==570882== by 0x1A8CB07D: ??? ==570882== by 0x15AD14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==570882== by 0x12379418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==570882== by 0x12312D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==570882== by 0x11009D38: PetscInitialize (pinit.c:924) ==570882== by 0xFEB758B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==570882== by 0xFEB75D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==570882== by 0x24AE20: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==570882== by 0x23F9F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==570882== by 0x2441E0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==570882== by 0x244080: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==570882== by 0x244717: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==570882== by 0x23DCE0: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==570882== ==570882== Open file descriptor 8: /dev/shm/open_mpi.0000 ==570882== at 0x106E1BCC: __open_nocancel (open64_nocancel.c:39) ==570882== by 0x10665C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==570882== by 0xFEEF822: ??? ==570882== by 0xFEEF96F: ??? ==570882== by 0x15B766DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==570882== by 0x15B76938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==570882== by 0x15B2C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==570882== by 0x15AD12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==570882== by 0x12379418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==570882== by 0x12312D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==570882== by 0x11009D38: PetscInitialize (pinit.c:924) ==570882== by 0xFEB758B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==570882== by 0xFEB75D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==570882== by 0x24AE20: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==570882== by 0x23F9F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==570882== by 0x2441E0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==570882== by 0x244080: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==570882== by 0x244717: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==570882== by 0x23DCE0: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==570882== ==570882== Open file descriptor 112: ==570882== ==570882== ==570882== Open file descriptor 109: ==570882== ==570882== ==570882== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==570882== ==570882== ==570882== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==570882== ==570882== ==570882== ==570882== HEAP SUMMARY: ==570882== in use at exit: 700,718 bytes in 9,374 blocks ==570882== total heap usage: 6,298,828 allocs, 6,289,454 frees, 2,068,197,499 bytes allocated ==570882== ==570882== LEAK SUMMARY: ==570882== definitely lost: 0 bytes in 0 blocks ==570882== indirectly lost: 0 bytes in 0 blocks ==570882== possibly lost: 0 bytes in 0 blocks ==570882== still reachable: 56 bytes in 3 blocks ==570882== suppressed: 700,662 bytes in 9,371 blocks ==570882== Reachable blocks (those to which a pointer was found) are not shown. ==570882== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==570882== ==570882== For lists of detected and suppressed errors, rerun with: -s ==570882== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)