==552273== Memcheck, a memory error detector ==552273== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==552273== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==552273== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithParticles -malloc_debug -malloc_dump -memory_info ==552273== Parent PID: 550491 ==552273== ==552273== ==552273== FILE DESCRIPTORS: 9 open (3 std) at exit. ==552273== Open file descriptor 12: ==552273== at 0xEDFC22D: pipe (pipe.c:29) ==552273== by 0x18BE707D: ??? ==552273== by 0x141EC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==552273== by 0x10A98418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552273== by 0x10A31D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552273== by 0xF728D38: PetscInitialize (pinit.c:924) ==552273== by 0xE5D658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==552273== by 0xE5D65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==552273== by 0x2F34EC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==552273== by 0x2E8533: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==552273== by 0x2ECFBA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==552273== by 0x2ECE5A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==552273== by 0x2ED4F1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==552273== by 0x2E6820: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==552273== ==552273== Open file descriptor 8: /dev/shm/open_mpi.0000 ==552273== at 0xEE00BCC: __open_nocancel (open64_nocancel.c:39) ==552273== by 0xED84C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==552273== by 0xE60E822: ??? ==552273== by 0xE60E96F: ??? ==552273== by 0x142916DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==552273== by 0x14291938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==552273== by 0x14247922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==552273== by 0x141EC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==552273== by 0x10A98418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552273== by 0x10A31D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552273== by 0xF728D38: PetscInitialize (pinit.c:924) ==552273== by 0xE5D658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==552273== by 0xE5D65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==552273== by 0x2F34EC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==552273== by 0x2E8533: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==552273== by 0x2ECFBA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==552273== by 0x2ECE5A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==552273== by 0x2ED4F1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==552273== by 0x2E6820: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==552273== ==552273== Open file descriptor 112: ==552273== ==552273== ==552273== Open file descriptor 109: ==552273== ==552273== ==552273== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithParticles_valgrind.txt ==552273== ==552273== ==552273== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==552273== ==552273== ==552273== ==552273== HEAP SUMMARY: ==552273== in use at exit: 700,770 bytes in 9,378 blocks ==552273== total heap usage: 105,217 allocs, 95,839 frees, 1,361,194,719 bytes allocated ==552273== ==552273== LEAK SUMMARY: ==552273== definitely lost: 0 bytes in 0 blocks ==552273== indirectly lost: 0 bytes in 0 blocks ==552273== possibly lost: 0 bytes in 0 blocks ==552273== still reachable: 56 bytes in 3 blocks ==552273== suppressed: 700,714 bytes in 9,375 blocks ==552273== Reachable blocks (those to which a pointer was found) are not shown. ==552273== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==552273== ==552273== For lists of detected and suppressed errors, rerun with: -s ==552273== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)