==552242== Memcheck, a memory error detector ==552242== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==552242== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==552242== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==552242== Parent PID: 550491 ==552242== ==552242== ==552242== FILE DESCRIPTORS: 9 open (3 std) at exit. ==552242== Open file descriptor 12: ==552242== at 0xEDB422D: pipe (pipe.c:29) ==552242== by 0x18BE707D: ??? ==552242== by 0x141EC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==552242== by 0x109B1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552242== by 0x1094AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552242== by 0xF63FD38: PetscInitialize (pinit.c:924) ==552242== by 0xE67558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==552242== by 0xE6755D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==552242== by 0x2F3E54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==552242== by 0x2E9173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==552242== by 0x2EDA8C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==552242== by 0x2ED92C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==552242== by 0x2EDFC3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==552242== by 0x2E7460: main (TestNodeBasedCellPopulation.cpp:19) ==552242== ==552242== Open file descriptor 8: /dev/shm/open_mpi.0000 ==552242== at 0xEDB8BCC: __open_nocancel (open64_nocancel.c:39) ==552242== by 0xED3CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==552242== by 0xE6AD822: ??? ==552242== by 0xE6AD96F: ??? ==552242== by 0x142916DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==552242== by 0x14291938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==552242== by 0x14247922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==552242== by 0x141EC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==552242== by 0x109B1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552242== by 0x1094AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552242== by 0xF63FD38: PetscInitialize (pinit.c:924) ==552242== by 0xE67558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==552242== by 0xE6755D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==552242== by 0x2F3E54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==552242== by 0x2E9173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==552242== by 0x2EDA8C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==552242== by 0x2ED92C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==552242== by 0x2EDFC3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==552242== by 0x2E7460: main (TestNodeBasedCellPopulation.cpp:19) ==552242== ==552242== Open file descriptor 112: ==552242== ==552242== ==552242== Open file descriptor 109: ==552242== ==552242== ==552242== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==552242== ==552242== ==552242== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==552242== ==552242== ==552242== ==552242== HEAP SUMMARY: ==552242== in use at exit: 700,702 bytes in 9,374 blocks ==552242== total heap usage: 20,194,181 allocs, 20,184,807 frees, 2,577,937,935 bytes allocated ==552242== ==552242== LEAK SUMMARY: ==552242== definitely lost: 0 bytes in 0 blocks ==552242== indirectly lost: 0 bytes in 0 blocks ==552242== possibly lost: 0 bytes in 0 blocks ==552242== still reachable: 56 bytes in 3 blocks ==552242== suppressed: 700,646 bytes in 9,371 blocks ==552242== Reachable blocks (those to which a pointer was found) are not shown. ==552242== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==552242== ==552242== For lists of detected and suppressed errors, rerun with: -s ==552242== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)