==552876== Memcheck, a memory error detector ==552876== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==552876== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==552876== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d -malloc_debug -malloc_dump -memory_info ==552876== Parent PID: 550491 ==552876== ==552876== ==552876== FILE DESCRIPTORS: 9 open (3 std) at exit. ==552876== Open file descriptor 12: ==552876== at 0xEDB822D: pipe (pipe.c:29) ==552876== by 0x18BE707D: ??? ==552876== by 0x141EC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==552876== by 0x10A98418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552876== by 0x10A31D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552876== by 0xF728D38: PetscInitialize (pinit.c:924) ==552876== by 0xE5D658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==552876== by 0xE5D65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==552876== by 0x13F008: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==552876== by 0x1388FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==552876== by 0x13B254: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==552876== by 0x13B150: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==552876== by 0x13B763: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==552876== by 0x137100: main (TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d.cpp:18) ==552876== ==552876== Open file descriptor 8: /dev/shm/open_mpi.0000 ==552876== at 0xEDBCBCC: __open_nocancel (open64_nocancel.c:39) ==552876== by 0xED40C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==552876== by 0xE60E822: ??? ==552876== by 0xE60E96F: ??? ==552876== by 0x142916DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==552876== by 0x14291938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==552876== by 0x14247922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==552876== by 0x141EC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==552876== by 0x10A98418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552876== by 0x10A31D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552876== by 0xF728D38: PetscInitialize (pinit.c:924) ==552876== by 0xE5D658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==552876== by 0xE5D65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==552876== by 0x13F008: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==552876== by 0x1388FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==552876== by 0x13B254: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==552876== by 0x13B150: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==552876== by 0x13B763: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==552876== by 0x137100: main (TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d.cpp:18) ==552876== ==552876== Open file descriptor 112: ==552876== ==552876== ==552876== Open file descriptor 109: ==552876== ==552876== ==552876== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d_valgrind.txt ==552876== ==552876== ==552876== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==552876== ==552876== ==552876== ==552876== HEAP SUMMARY: ==552876== in use at exit: 700,702 bytes in 9,374 blocks ==552876== total heap usage: 6,671,690 allocs, 6,662,316 frees, 9,009,654,806 bytes allocated ==552876== ==552876== LEAK SUMMARY: ==552876== definitely lost: 0 bytes in 0 blocks ==552876== indirectly lost: 0 bytes in 0 blocks ==552876== possibly lost: 0 bytes in 0 blocks ==552876== still reachable: 56 bytes in 3 blocks ==552876== suppressed: 700,646 bytes in 9,371 blocks ==552876== Reachable blocks (those to which a pointer was found) are not shown. ==552876== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==552876== ==552876== For lists of detected and suppressed errors, rerun with: -s ==552876== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)