==552921== Memcheck, a memory error detector ==552921== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==552921== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==552921== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==552921== Parent PID: 550491 ==552921== ==552921== ==552921== FILE DESCRIPTORS: 9 open (3 std) at exit. ==552921== Open file descriptor 12: ==552921== at 0xF1AC22D: pipe (pipe.c:29) ==552921== by 0x18BE807D: ??? ==552921== by 0x141EB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==552921== by 0x10A98418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552921== by 0x10A31D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552921== by 0xF728D38: PetscInitialize (pinit.c:924) ==552921== by 0xE98658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==552921== by 0xE9865D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==552921== by 0x234CAC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==552921== by 0x22CD2B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==552921== by 0x230952: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==552921== by 0x2307F2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==552921== by 0x230E89: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==552921== by 0x22AFE0: main (TestOffLatticeSimulationWithPdes.cpp:19) ==552921== ==552921== Open file descriptor 8: /dev/shm/open_mpi.0000 ==552921== at 0xF1B0BCC: __open_nocancel (open64_nocancel.c:39) ==552921== by 0xF134C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==552921== by 0xE9BE822: ??? ==552921== by 0xE9BE96F: ??? ==552921== by 0x142906DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==552921== by 0x14290938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==552921== by 0x14246922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==552921== by 0x141EB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==552921== by 0x10A98418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552921== by 0x10A31D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552921== by 0xF728D38: PetscInitialize (pinit.c:924) ==552921== by 0xE98658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==552921== by 0xE9865D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==552921== by 0x234CAC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==552921== by 0x22CD2B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==552921== by 0x230952: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==552921== by 0x2307F2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==552921== by 0x230E89: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==552921== by 0x22AFE0: main (TestOffLatticeSimulationWithPdes.cpp:19) ==552921== ==552921== Open file descriptor 112: ==552921== ==552921== ==552921== Open file descriptor 109: ==552921== ==552921== ==552921== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==552921== ==552921== ==552921== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==552921== ==552921== ==552921== ==552921== HEAP SUMMARY: ==552921== in use at exit: 700,702 bytes in 9,374 blocks ==552921== total heap usage: 7,459,919 allocs, 7,450,545 frees, 2,653,078,069 bytes allocated ==552921== ==552921== LEAK SUMMARY: ==552921== definitely lost: 0 bytes in 0 blocks ==552921== indirectly lost: 0 bytes in 0 blocks ==552921== possibly lost: 0 bytes in 0 blocks ==552921== still reachable: 56 bytes in 3 blocks ==552921== suppressed: 700,646 bytes in 9,371 blocks ==552921== Reachable blocks (those to which a pointer was found) are not shown. ==552921== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==552921== ==552921== For lists of detected and suppressed errors, rerun with: -s ==552921== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)