==553006== Memcheck, a memory error detector ==553006== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==553006== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==553006== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==553006== Parent PID: 550491 ==553006== ==553006== ==553006== FILE DESCRIPTORS: 9 open (3 std) at exit. ==553006== Open file descriptor 12: ==553006== at 0x102B122D: pipe (pipe.c:29) ==553006== by 0x18BE707D: ??? ==553006== by 0x1414E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==553006== by 0xFAD4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==553006== by 0xFA6DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==553006== by 0xE764D38: PetscInitialize (pinit.c:924) ==553006== by 0xE5D658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==553006== by 0xE5D65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==553006== by 0x210737: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==553006== by 0x208C73: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==553006== by 0x20C728: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==553006== by 0x20C5C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==553006== by 0x20CC5F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==553006== by 0x206F60: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==553006== ==553006== Open file descriptor 8: /dev/shm/open_mpi.0000 ==553006== at 0x102B5BCC: __open_nocancel (open64_nocancel.c:39) ==553006== by 0x10239C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==553006== by 0xE60E822: ??? ==553006== by 0xE60E96F: ??? ==553006== by 0x141F36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==553006== by 0x141F3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==553006== by 0x141A9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==553006== by 0x1414E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==553006== by 0xFAD4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==553006== by 0xFA6DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==553006== by 0xE764D38: PetscInitialize (pinit.c:924) ==553006== by 0xE5D658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==553006== by 0xE5D65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==553006== by 0x210737: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==553006== by 0x208C73: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==553006== by 0x20C728: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==553006== by 0x20C5C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==553006== by 0x20CC5F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==553006== by 0x206F60: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==553006== ==553006== Open file descriptor 112: ==553006== ==553006== ==553006== Open file descriptor 109: ==553006== ==553006== ==553006== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithVertexBasedCellPopulation_valgrind.txt ==553006== ==553006== ==553006== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==553006== ==553006== ==553006== ==553006== HEAP SUMMARY: ==553006== in use at exit: 700,702 bytes in 9,374 blocks ==553006== total heap usage: 9,623,261 allocs, 9,613,887 frees, 2,573,396,336 bytes allocated ==553006== ==553006== LEAK SUMMARY: ==553006== definitely lost: 0 bytes in 0 blocks ==553006== indirectly lost: 0 bytes in 0 blocks ==553006== possibly lost: 0 bytes in 0 blocks ==553006== still reachable: 56 bytes in 3 blocks ==553006== suppressed: 700,646 bytes in 9,371 blocks ==553006== Reachable blocks (those to which a pointer was found) are not shown. ==553006== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==553006== ==553006== For lists of detected and suppressed errors, rerun with: -s ==553006== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)