==552497== Memcheck, a memory error detector ==552497== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==552497== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==552497== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==552497== Parent PID: 550491 ==552497== ==552497== ==552497== FILE DESCRIPTORS: 9 open (3 std) at exit. ==552497== Open file descriptor 12: ==552497== at 0xEDFC22D: pipe (pipe.c:29) ==552497== by 0x18BE707D: ??? ==552497== by 0x141EC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==552497== by 0x10A98418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552497== by 0x10A31D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552497== by 0xF728D38: PetscInitialize (pinit.c:924) ==552497== by 0xE5D658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==552497== by 0xE5D65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==552497== by 0x322FAA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==552497== by 0x317C93: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==552497== by 0x31C156: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==552497== by 0x31BFF6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==552497== by 0x31C68D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==552497== by 0x315F80: main (TestOffLatticeSimulation.cpp:19) ==552497== ==552497== Open file descriptor 8: /dev/shm/open_mpi.0000 ==552497== at 0xEE00BCC: __open_nocancel (open64_nocancel.c:39) ==552497== by 0xED84C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==552497== by 0xE60E822: ??? ==552497== by 0xE60E96F: ??? ==552497== by 0x142916DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==552497== by 0x14291938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==552497== by 0x14247922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==552497== by 0x141EC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==552497== by 0x10A98418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552497== by 0x10A31D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552497== by 0xF728D38: PetscInitialize (pinit.c:924) ==552497== by 0xE5D658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==552497== by 0xE5D65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==552497== by 0x322FAA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==552497== by 0x317C93: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==552497== by 0x31C156: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==552497== by 0x31BFF6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==552497== by 0x31C68D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==552497== by 0x315F80: main (TestOffLatticeSimulation.cpp:19) ==552497== ==552497== Open file descriptor 112: ==552497== ==552497== ==552497== Open file descriptor 109: ==552497== ==552497== ==552497== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==552497== ==552497== ==552497== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==552497== ==552497== ==552497== ==552497== HEAP SUMMARY: ==552497== in use at exit: 700,702 bytes in 9,374 blocks ==552497== total heap usage: 12,820,531 allocs, 12,811,157 frees, 3,863,490,156 bytes allocated ==552497== ==552497== LEAK SUMMARY: ==552497== definitely lost: 0 bytes in 0 blocks ==552497== indirectly lost: 0 bytes in 0 blocks ==552497== possibly lost: 0 bytes in 0 blocks ==552497== still reachable: 56 bytes in 3 blocks ==552497== suppressed: 700,646 bytes in 9,371 blocks ==552497== Reachable blocks (those to which a pointer was found) are not shown. ==552497== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==552497== ==552497== For lists of detected and suppressed errors, rerun with: -s ==552497== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)