==553256== Memcheck, a memory error detector ==553256== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==553256== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==553256== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==553256== Parent PID: 550491 ==553256== ==553256== ==553256== FILE DESCRIPTORS: 9 open (3 std) at exit. ==553256== Open file descriptor 12: ==553256== at 0xF27822D: pipe (pipe.c:29) ==553256== by 0x18BEA07D: ??? ==553256== by 0x1430F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==553256== by 0x10F14418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==553256== by 0x10EADD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==553256== by 0xFBA4D38: PetscInitialize (pinit.c:924) ==553256== by 0xE5D658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==553256== by 0xE5D65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==553256== by 0x1DFCCE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==553256== by 0x1D7FD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==553256== by 0x1DB8B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==553256== by 0x1DB758: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==553256== by 0x1DBDEF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==553256== by 0x1D62C0: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==553256== ==553256== Open file descriptor 8: /dev/shm/open_mpi.0000 ==553256== at 0xF27CBCC: __open_nocancel (open64_nocancel.c:39) ==553256== by 0xF200C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==553256== by 0xE60E822: ??? ==553256== by 0xE60E96F: ??? ==553256== by 0x143B46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==553256== by 0x143B4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==553256== by 0x1436A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==553256== by 0x1430F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==553256== by 0x10F14418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==553256== by 0x10EADD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==553256== by 0xFBA4D38: PetscInitialize (pinit.c:924) ==553256== by 0xE5D658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==553256== by 0xE5D65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==553256== by 0x1DFCCE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==553256== by 0x1D7FD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==553256== by 0x1DB8B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==553256== by 0x1DB758: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==553256== by 0x1DBDEF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==553256== by 0x1D62C0: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==553256== ==553256== Open file descriptor 112: ==553256== ==553256== ==553256== Open file descriptor 109: ==553256== ==553256== ==553256== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithCaBasedCellPopulation_valgrind.txt ==553256== ==553256== ==553256== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==553256== ==553256== ==553256== ==553256== HEAP SUMMARY: ==553256== in use at exit: 700,702 bytes in 9,374 blocks ==553256== total heap usage: 6,915,033 allocs, 6,905,659 frees, 8,038,914,789 bytes allocated ==553256== ==553256== LEAK SUMMARY: ==553256== definitely lost: 0 bytes in 0 blocks ==553256== indirectly lost: 0 bytes in 0 blocks ==553256== possibly lost: 0 bytes in 0 blocks ==553256== still reachable: 56 bytes in 3 blocks ==553256== suppressed: 700,646 bytes in 9,371 blocks ==553256== Reachable blocks (those to which a pointer was found) are not shown. ==553256== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==553256== ==553256== For lists of detected and suppressed errors, rerun with: -s ==553256== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)