==556543== Memcheck, a memory error detector ==556543== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==556543== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==556543== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==556543== Parent PID: 550491 ==556543== ==556543== ==556543== FILE DESCRIPTORS: 9 open (3 std) at exit. ==556543== Open file descriptor 12: ==556543== at 0xF16A22D: pipe (pipe.c:29) ==556543== by 0x18BE807D: ??? ==556543== by 0x141EB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==556543== by 0x10A98418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==556543== by 0x10A31D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==556543== by 0xF728D38: PetscInitialize (pinit.c:924) ==556543== by 0xE98658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==556543== by 0xE9865D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==556543== by 0x14102E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==556543== by 0x13A587: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==556543== by 0x13D31E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==556543== by 0x13D1BE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==556543== by 0x13D855: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==556543== by 0x138880: main (TestOnLatticeSimulationWithPdes.cpp:19) ==556543== ==556543== Open file descriptor 8: /dev/shm/open_mpi.0000 ==556543== at 0xF16EBCC: __open_nocancel (open64_nocancel.c:39) ==556543== by 0xF0F2C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==556543== by 0xE9BE822: ??? ==556543== by 0xE9BE96F: ??? ==556543== by 0x142906DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==556543== by 0x14290938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==556543== by 0x14246922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==556543== by 0x141EB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==556543== by 0x10A98418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==556543== by 0x10A31D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==556543== by 0xF728D38: PetscInitialize (pinit.c:924) ==556543== by 0xE98658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==556543== by 0xE9865D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==556543== by 0x14102E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==556543== by 0x13A587: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==556543== by 0x13D31E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==556543== by 0x13D1BE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==556543== by 0x13D855: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==556543== by 0x138880: main (TestOnLatticeSimulationWithPdes.cpp:19) ==556543== ==556543== Open file descriptor 112: ==556543== ==556543== ==556543== Open file descriptor 109: ==556543== ==556543== ==556543== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==556543== ==556543== ==556543== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==556543== ==556543== ==556543== ==556543== HEAP SUMMARY: ==556543== in use at exit: 700,770 bytes in 9,378 blocks ==556543== total heap usage: 2,341,262 allocs, 2,331,884 frees, 1,789,385,717 bytes allocated ==556543== ==556543== LEAK SUMMARY: ==556543== definitely lost: 0 bytes in 0 blocks ==556543== indirectly lost: 0 bytes in 0 blocks ==556543== possibly lost: 0 bytes in 0 blocks ==556543== still reachable: 56 bytes in 3 blocks ==556543== suppressed: 700,714 bytes in 9,375 blocks ==556543== Reachable blocks (those to which a pointer was found) are not shown. ==556543== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==556543== ==556543== For lists of detected and suppressed errors, rerun with: -s ==556543== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)