==571241== Memcheck, a memory error detector ==571241== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==571241== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==571241== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningCryptSimulationsWithMutationsTutorial -malloc_debug -malloc_dump -memory_info ==571241== Parent PID: 550491 ==571241== ==571241== ==571241== FILE DESCRIPTORS: 9 open (3 std) at exit. ==571241== Open file descriptor 12: ==571241== at 0x11A6922D: pipe (pipe.c:29) ==571241== by 0x1A8C907D: ??? ==571241== by 0x15A334CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==571241== by 0x11373418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==571241== by 0x1130CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==571241== by 0xFFE3D38: PetscInitialize (pinit.c:924) ==571241== by 0xFEB758B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==571241== by 0xFEB75D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==571241== by 0x12E5E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==571241== by 0x1287FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==571241== by 0x12AC06: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==571241== by 0x12AB02: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==571241== by 0x12B115: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==571241== by 0x127000: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==571241== ==571241== Open file descriptor 8: /dev/shm/open_mpi.0000 ==571241== at 0x11A6DBCC: __open_nocancel (open64_nocancel.c:39) ==571241== by 0x119F1C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==571241== by 0x1126D822: ??? ==571241== by 0x1126D96F: ??? ==571241== by 0x15AD86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==571241== by 0x15AD8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==571241== by 0x15A8E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==571241== by 0x15A332DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==571241== by 0x11373418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==571241== by 0x1130CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==571241== by 0xFFE3D38: PetscInitialize (pinit.c:924) ==571241== by 0xFEB758B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==571241== by 0xFEB75D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==571241== by 0x12E5E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==571241== by 0x1287FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==571241== by 0x12AC06: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==571241== by 0x12AB02: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==571241== by 0x12B115: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==571241== by 0x127000: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==571241== ==571241== Open file descriptor 112: ==571241== ==571241== ==571241== Open file descriptor 109: ==571241== ==571241== ==571241== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningCryptSimulationsWithMutationsTutorial_valgrind.txt ==571241== ==571241== ==571241== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==571241== ==571241== ==571241== ==571241== HEAP SUMMARY: ==571241== in use at exit: 700,718 bytes in 9,374 blocks ==571241== total heap usage: 16,186,117 allocs, 16,176,743 frees, 2,844,275,032 bytes allocated ==571241== ==571241== LEAK SUMMARY: ==571241== definitely lost: 0 bytes in 0 blocks ==571241== indirectly lost: 0 bytes in 0 blocks ==571241== possibly lost: 0 bytes in 0 blocks ==571241== still reachable: 56 bytes in 3 blocks ==571241== suppressed: 700,662 bytes in 9,371 blocks ==571241== Reachable blocks (those to which a pointer was found) are not shown. ==571241== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==571241== ==571241== For lists of detected and suppressed errors, rerun with: -s ==571241== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)