==568798== Memcheck, a memory error detector ==568798== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==568798== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==568798== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningPottsBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==568798== Parent PID: 550491 ==568798== ==568798== ==568798== FILE DESCRIPTORS: 9 open (3 std) at exit. ==568798== Open file descriptor 12: ==568798== at 0xD38A22D: pipe (pipe.c:29) ==568798== by 0x18BE907D: ??? ==568798== by 0x141EA4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==568798== by 0x109B1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==568798== by 0x1094AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==568798== by 0xF641D38: PetscInitialize (pinit.c:924) ==568798== by 0xCC8D58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==568798== by 0xCC8D5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==568798== by 0x12EAC6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==568798== by 0x129E6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==568798== by 0x12C62E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==568798== by 0x12C4CF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==568798== by 0x12CB65: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==568798== by 0x1281A0: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==568798== ==568798== Open file descriptor 8: /dev/shm/open_mpi.0000 ==568798== at 0xD38EBCC: __open_nocancel (open64_nocancel.c:39) ==568798== by 0xD312C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==568798== by 0xCCC5822: ??? ==568798== by 0xCCC596F: ??? ==568798== by 0x142916DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==568798== by 0x14291938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==568798== by 0x14247922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==568798== by 0x141EA2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==568798== by 0x109B1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==568798== by 0x1094AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==568798== by 0xF641D38: PetscInitialize (pinit.c:924) ==568798== by 0xCC8D58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==568798== by 0xCC8D5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==568798== by 0x12EAC6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==568798== by 0x129E6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==568798== by 0x12C62E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==568798== by 0x12C4CF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==568798== by 0x12CB65: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==568798== by 0x1281A0: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==568798== ==568798== Open file descriptor 112: ==568798== ==568798== ==568798== Open file descriptor 109: ==568798== ==568798== ==568798== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningPottsBasedSimulationsTutorial_valgrind.txt ==568798== ==568798== ==568798== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==568798== ==568798== ==568798== ==568798== HEAP SUMMARY: ==568798== in use at exit: 700,702 bytes in 9,374 blocks ==568798== total heap usage: 40,686,683 allocs, 40,677,309 frees, 3,844,680,599 bytes allocated ==568798== ==568798== LEAK SUMMARY: ==568798== definitely lost: 0 bytes in 0 blocks ==568798== indirectly lost: 0 bytes in 0 blocks ==568798== possibly lost: 0 bytes in 0 blocks ==568798== still reachable: 56 bytes in 3 blocks ==568798== suppressed: 700,646 bytes in 9,371 blocks ==568798== Reachable blocks (those to which a pointer was found) are not shown. ==568798== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==568798== ==568798== For lists of detected and suppressed errors, rerun with: -s ==568798== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)