==568854== Memcheck, a memory error detector ==568854== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==568854== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==568854== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningTumourSpheroidSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==568854== Parent PID: 550491 ==568854== ==568854== ==568854== FILE DESCRIPTORS: 9 open (3 std) at exit. ==568854== Open file descriptor 12: ==568854== at 0xF08122D: pipe (pipe.c:29) ==568854== by 0x18BE807D: ??? ==568854== by 0x141EB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==568854== by 0x109B1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==568854== by 0x1094AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==568854== by 0xF63FD38: PetscInitialize (pinit.c:924) ==568854== by 0xE98658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==568854== by 0xE9865D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==568854== by 0x1261C0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==568854== by 0x12041D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==568854== by 0x1228A6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==568854== by 0x1227A2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==568854== by 0x122DB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==568854== by 0x11EC20: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==568854== ==568854== Open file descriptor 8: /dev/shm/open_mpi.0000 ==568854== at 0xF085BCC: __open_nocancel (open64_nocancel.c:39) ==568854== by 0xF009C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==568854== by 0xE9BE822: ??? ==568854== by 0xE9BE96F: ??? ==568854== by 0x142906DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==568854== by 0x14290938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==568854== by 0x14246922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==568854== by 0x141EB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==568854== by 0x109B1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==568854== by 0x1094AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==568854== by 0xF63FD38: PetscInitialize (pinit.c:924) ==568854== by 0xE98658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==568854== by 0xE9865D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==568854== by 0x1261C0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==568854== by 0x12041D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==568854== by 0x1228A6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==568854== by 0x1227A2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==568854== by 0x122DB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==568854== by 0x11EC20: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==568854== ==568854== Open file descriptor 112: ==568854== ==568854== ==568854== Open file descriptor 109: ==568854== ==568854== ==568854== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningTumourSpheroidSimulationsTutorial_valgrind.txt ==568854== ==568854== ==568854== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==568854== ==568854== ==568854== ==568854== HEAP SUMMARY: ==568854== in use at exit: 700,770 bytes in 9,378 blocks ==568854== total heap usage: 2,084,382 allocs, 2,075,004 frees, 1,689,108,247 bytes allocated ==568854== ==568854== LEAK SUMMARY: ==568854== definitely lost: 0 bytes in 0 blocks ==568854== indirectly lost: 0 bytes in 0 blocks ==568854== possibly lost: 0 bytes in 0 blocks ==568854== still reachable: 56 bytes in 3 blocks ==568854== suppressed: 700,714 bytes in 9,375 blocks ==568854== Reachable blocks (those to which a pointer was found) are not shown. ==568854== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==568854== ==568854== For lists of detected and suppressed errors, rerun with: -s ==568854== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)