==571364== Memcheck, a memory error detector ==571364== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==571364== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==571364== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningVertexBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==571364== Parent PID: 550491 ==571364== ==571364== ==571364== FILE DESCRIPTORS: 9 open (3 std) at exit. ==571364== Open file descriptor 12: ==571364== at 0x11A6922D: pipe (pipe.c:29) ==571364== by 0x1A8C907D: ??? ==571364== by 0x15A334CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==571364== by 0x11373418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==571364== by 0x1130CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==571364== by 0xFFE3D38: PetscInitialize (pinit.c:924) ==571364== by 0xFEB758B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==571364== by 0xFEB75D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==571364== by 0x12A553: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==571364== by 0x1246FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==571364== by 0x126B38: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==571364== by 0x126A34: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==571364== by 0x127047: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==571364== by 0x122F00: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==571364== ==571364== Open file descriptor 8: /dev/shm/open_mpi.0000 ==571364== at 0x11A6DBCC: __open_nocancel (open64_nocancel.c:39) ==571364== by 0x119F1C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==571364== by 0x1126D822: ??? ==571364== by 0x1126D96F: ??? ==571364== by 0x15AD86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==571364== by 0x15AD8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==571364== by 0x15A8E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==571364== by 0x15A332DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==571364== by 0x11373418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==571364== by 0x1130CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==571364== by 0xFFE3D38: PetscInitialize (pinit.c:924) ==571364== by 0xFEB758B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==571364== by 0xFEB75D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==571364== by 0x12A553: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==571364== by 0x1246FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==571364== by 0x126B38: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==571364== by 0x126A34: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==571364== by 0x127047: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==571364== by 0x122F00: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==571364== ==571364== Open file descriptor 112: ==571364== ==571364== ==571364== Open file descriptor 109: ==571364== ==571364== ==571364== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedCryptSimulationsTutorial_valgrind.txt ==571364== ==571364== ==571364== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==571364== ==571364== ==571364== ==571364== HEAP SUMMARY: ==571364== in use at exit: 700,866 bytes in 9,379 blocks ==571364== total heap usage: 1,617,764 allocs, 1,608,385 frees, 1,472,853,140 bytes allocated ==571364== ==571364== LEAK SUMMARY: ==571364== definitely lost: 0 bytes in 0 blocks ==571364== indirectly lost: 0 bytes in 0 blocks ==571364== possibly lost: 0 bytes in 0 blocks ==571364== still reachable: 136 bytes in 4 blocks ==571364== suppressed: 700,730 bytes in 9,375 blocks ==571364== Reachable blocks (those to which a pointer was found) are not shown. ==571364== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==571364== ==571364== For lists of detected and suppressed errors, rerun with: -s ==571364== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)