==552096== Memcheck, a memory error detector ==552096== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==552096== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==552096== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestTysonNovak2001OdeSystem -malloc_debug -malloc_dump -memory_info ==552096== Parent PID: 550491 ==552096== ==552096== ==552096== FILE DESCRIPTORS: 9 open (3 std) at exit. ==552096== Open file descriptor 12: ==552096== at 0xD35A22D: pipe (pipe.c:29) ==552096== by 0x18BEA07D: ??? ==552096== by 0x1419E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==552096== by 0x1066A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552096== by 0x10603D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552096== by 0xF2FAD38: PetscInitialize (pinit.c:924) ==552096== by 0xCF6258B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==552096== by 0xCF625D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==552096== by 0x123FB6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==552096== by 0x11F5E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==552096== by 0x121B8E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==552096== by 0x121A8A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==552096== by 0x12209D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==552096== by 0x11DDE5: main (TestTysonNovak2001OdeSystem.cpp:18) ==552096== ==552096== Open file descriptor 8: /dev/shm/open_mpi.0000 ==552096== at 0xD35EBCC: __open_nocancel (open64_nocancel.c:39) ==552096== by 0xD2E2C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==552096== by 0xCF9A822: ??? ==552096== by 0xCF9A96F: ??? ==552096== by 0x142436DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==552096== by 0x14243938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==552096== by 0x141F9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==552096== by 0x1419E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==552096== by 0x1066A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552096== by 0x10603D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==552096== by 0xF2FAD38: PetscInitialize (pinit.c:924) ==552096== by 0xCF6258B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==552096== by 0xCF625D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==552096== by 0x123FB6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==552096== by 0x11F5E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==552096== by 0x121B8E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==552096== by 0x121A8A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==552096== by 0x12209D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==552096== by 0x11DDE5: main (TestTysonNovak2001OdeSystem.cpp:18) ==552096== ==552096== Open file descriptor 112: ==552096== ==552096== ==552096== Open file descriptor 109: ==552096== ==552096== ==552096== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestTysonNovak2001OdeSystem_valgrind.txt ==552096== ==552096== ==552096== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==552096== ==552096== ==552096== ==552096== HEAP SUMMARY: ==552096== in use at exit: 700,738 bytes in 9,377 blocks ==552096== total heap usage: 60,174 allocs, 50,797 frees, 1,354,340,391 bytes allocated ==552096== ==552096== LEAK SUMMARY: ==552096== definitely lost: 0 bytes in 0 blocks ==552096== indirectly lost: 0 bytes in 0 blocks ==552096== possibly lost: 0 bytes in 0 blocks ==552096== still reachable: 24 bytes in 2 blocks ==552096== suppressed: 700,714 bytes in 9,375 blocks ==552096== Reachable blocks (those to which a pointer was found) are not shown. ==552096== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==552096== ==552096== For lists of detected and suppressed errors, rerun with: -s ==552096== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)