==616354== Memcheck, a memory error detector ==616354== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==616354== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==616354== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithParticles -malloc_debug -malloc_dump -memory_info ==616354== Parent PID: 614575 ==616354== ==616354== ==616354== FILE DESCRIPTORS: 9 open (3 std) at exit. ==616354== Open file descriptor 12: ==616354== at 0xED1622D: pipe (pipe.c:29) ==616354== by 0x18AF107D: ??? ==616354== by 0x140F24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==616354== by 0x109A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==616354== by 0x10939D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==616354== by 0xF630D38: PetscInitialize (pinit.c:924) ==616354== by 0xE4F071D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==616354== by 0xE4F076B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==616354== by 0x2EC6E8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==616354== by 0x2E1673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==616354== by 0x2E61AA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==616354== by 0x2E604A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==616354== by 0x2E66E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==616354== by 0x2DF960: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==616354== ==616354== Open file descriptor 8: /dev/shm/open_mpi.0000 ==616354== at 0xED1ABCC: __open_nocancel (open64_nocancel.c:39) ==616354== by 0xEC9EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==616354== by 0xE528822: ??? ==616354== by 0xE52896F: ??? ==616354== by 0x141976DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==616354== by 0x14197938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==616354== by 0x1414D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==616354== by 0x140F22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==616354== by 0x109A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==616354== by 0x10939D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==616354== by 0xF630D38: PetscInitialize (pinit.c:924) ==616354== by 0xE4F071D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==616354== by 0xE4F076B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==616354== by 0x2EC6E8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==616354== by 0x2E1673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==616354== by 0x2E61AA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==616354== by 0x2E604A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==616354== by 0x2E66E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==616354== by 0x2DF960: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==616354== ==616354== Open file descriptor 114: ==616354== ==616354== ==616354== Open file descriptor 110: ==616354== ==616354== ==616354== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithParticles_valgrind.txt ==616354== ==616354== ==616354== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==616354== ==616354== ==616354== ==616354== HEAP SUMMARY: ==616354== in use at exit: 700,770 bytes in 9,378 blocks ==616354== total heap usage: 105,219 allocs, 95,841 frees, 1,361,194,912 bytes allocated ==616354== ==616354== LEAK SUMMARY: ==616354== definitely lost: 0 bytes in 0 blocks ==616354== indirectly lost: 0 bytes in 0 blocks ==616354== possibly lost: 0 bytes in 0 blocks ==616354== still reachable: 56 bytes in 3 blocks ==616354== suppressed: 700,714 bytes in 9,375 blocks ==616354== Reachable blocks (those to which a pointer was found) are not shown. ==616354== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==616354== ==616354== For lists of detected and suppressed errors, rerun with: -s ==616354== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)