==634649== Memcheck, a memory error detector ==634649== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==634649== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==634649== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOdeBasedCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==634649== Parent PID: 614575 ==634649== ==634649== ==634649== FILE DESCRIPTORS: 9 open (3 std) at exit. ==634649== Open file descriptor 12: ==634649== at 0x1033222D: pipe (pipe.c:29) ==634649== by 0x1A7C307D: ??? ==634649== by 0x149644CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==634649== by 0xFC3C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==634649== by 0xFBD5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==634649== by 0xE8CCD38: PetscInitialize (pinit.c:924) ==634649== by 0xE73E71D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==634649== by 0xE73E76B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==634649== by 0x19DC7F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==634649== by 0x1942F7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==634649== by 0x197A60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==634649== by 0x197900: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==634649== by 0x197F97: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==634649== by 0x1900E0: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==634649== ==634649== Open file descriptor 8: /dev/shm/open_mpi.0000 ==634649== at 0x10336BCC: __open_nocancel (open64_nocancel.c:39) ==634649== by 0x102BAC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==634649== by 0xE776822: ??? ==634649== by 0xE77696F: ??? ==634649== by 0x14A096DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==634649== by 0x14A09938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==634649== by 0x149BF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==634649== by 0x149642DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==634649== by 0xFC3C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==634649== by 0xFBD5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==634649== by 0xE8CCD38: PetscInitialize (pinit.c:924) ==634649== by 0xE73E71D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==634649== by 0xE73E76B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==634649== by 0x19DC7F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==634649== by 0x1942F7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==634649== by 0x197A60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==634649== by 0x197900: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==634649== by 0x197F97: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==634649== by 0x1900E0: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==634649== ==634649== Open file descriptor 114: ==634649== ==634649== ==634649== Open file descriptor 110: ==634649== ==634649== ==634649== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModelsForCrypt_valgrind.txt ==634649== ==634649== ==634649== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==634649== ==634649== ==634649== ==634649== HEAP SUMMARY: ==634649== in use at exit: 700,850 bytes in 9,379 blocks ==634649== total heap usage: 863,776 allocs, 854,397 frees, 1,475,931,002 bytes allocated ==634649== ==634649== LEAK SUMMARY: ==634649== definitely lost: 0 bytes in 0 blocks ==634649== indirectly lost: 0 bytes in 0 blocks ==634649== possibly lost: 0 bytes in 0 blocks ==634649== still reachable: 120 bytes in 4 blocks ==634649== suppressed: 700,730 bytes in 9,375 blocks ==634649== Reachable blocks (those to which a pointer was found) are not shown. ==634649== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==634649== ==634649== For lists of detected and suppressed errors, rerun with: -s ==634649== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)