==686342== Memcheck, a memory error detector ==686342== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==686342== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==686342== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation3d -malloc_debug -malloc_dump -memory_info ==686342== Parent PID: 684113 ==686342== ==686342== ==686342== FILE DESCRIPTORS: 9 open (3 std) at exit. ==686342== Open file descriptor 12: ==686342== at 0x101CB22D: pipe (pipe.c:29) ==686342== by 0x18AEF07D: ??? ==686342== by 0x140544CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==686342== by 0xF9EE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==686342== by 0xF987D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==686342== by 0xE67ED38: PetscInitialize (pinit.c:924) ==686342== by 0xE4F071D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==686342== by 0xE4F076B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==686342== by 0x209DAB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==686342== by 0x202661: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==686342== by 0x205AE2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==686342== by 0x2059DE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==686342== by 0x205FF1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==686342== by 0x200E20: main (TestOffLatticeSimulation3d.cpp:18) ==686342== ==686342== Open file descriptor 8: /dev/shm/open_mpi.0000 ==686342== at 0x101CFBCC: __open_nocancel (open64_nocancel.c:39) ==686342== by 0x10153C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==686342== by 0xE528822: ??? ==686342== by 0xE52896F: ??? ==686342== by 0x140F96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==686342== by 0x140F9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==686342== by 0x140AF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==686342== by 0x140542DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==686342== by 0xF9EE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==686342== by 0xF987D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==686342== by 0xE67ED38: PetscInitialize (pinit.c:924) ==686342== by 0xE4F071D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==686342== by 0xE4F076B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==686342== by 0x209DAB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==686342== by 0x202661: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==686342== by 0x205AE2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==686342== by 0x2059DE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==686342== by 0x205FF1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==686342== by 0x200E20: main (TestOffLatticeSimulation3d.cpp:18) ==686342== ==686342== Open file descriptor 114: ==686342== ==686342== ==686342== Open file descriptor 110: ==686342== ==686342== ==686342== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation3d_valgrind.txt ==686342== ==686342== ==686342== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==686342== ==686342== ==686342== ==686342== HEAP SUMMARY: ==686342== in use at exit: 700,770 bytes in 9,378 blocks ==686342== total heap usage: 853,195 allocs, 843,817 frees, 1,518,039,182 bytes allocated ==686342== ==686342== LEAK SUMMARY: ==686342== definitely lost: 0 bytes in 0 blocks ==686342== indirectly lost: 0 bytes in 0 blocks ==686342== possibly lost: 0 bytes in 0 blocks ==686342== still reachable: 56 bytes in 3 blocks ==686342== suppressed: 700,714 bytes in 9,375 blocks ==686342== Reachable blocks (those to which a pointer was found) are not shown. ==686342== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==686342== ==686342== For lists of detected and suppressed errors, rerun with: -s ==686342== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)