==806898== Memcheck, a memory error detector ==806898== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==806898== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==806898== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/io/test/TestColumnDataReaderWriter -malloc_debug -malloc_dump -memory_info ==806898== Parent PID: 806642 ==806898== ==806898== ==806898== FILE DESCRIPTORS: 9 open (3 std) at exit. ==806898== Open file descriptor 12: ==806898== at 0x61F722D: pipe (pipe.c:29) ==806898== by 0xAF5507D: ??? ==806898== by 0x8A6B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==806898== by 0x5E48418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==806898== by 0x5DE1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==806898== by 0x4AB6D38: PetscInitialize (pinit.c:924) ==806898== by 0x498A71D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==806898== by 0x498A76B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==806898== by 0x124F35: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==806898== by 0x11E9CF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==806898== by 0x1219F8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==806898== by 0x121898: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==806898== by 0x121F2F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==806898== by 0x11CD00: main (TestColumnDataReaderWriter.cpp:19) ==806898== ==806898== Open file descriptor 8: /dev/shm/open_mpi.0000 ==806898== at 0x61FBBCC: __open_nocancel (open64_nocancel.c:39) ==806898== by 0x617FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==806898== by 0x5D40822: ??? ==806898== by 0x5D4096F: ??? ==806898== by 0x8B106DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==806898== by 0x8B10938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==806898== by 0x8AC6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==806898== by 0x8A6B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==806898== by 0x5E48418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==806898== by 0x5DE1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==806898== by 0x4AB6D38: PetscInitialize (pinit.c:924) ==806898== by 0x498A71D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==806898== by 0x498A76B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==806898== by 0x124F35: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==806898== by 0x11E9CF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==806898== by 0x1219F8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==806898== by 0x121898: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==806898== by 0x121F2F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==806898== by 0x11CD00: main (TestColumnDataReaderWriter.cpp:19) ==806898== ==806898== Open file descriptor 114: ==806898== ==806898== ==806898== Open file descriptor 110: ==806898== ==806898== ==806898== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestColumnDataReaderWriter_valgrind.txt ==806898== ==806898== ==806898== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==806898== ==806898== ==806898== ==806898== HEAP SUMMARY: ==806898== in use at exit: 700,290 bytes in 9,377 blocks ==806898== total heap usage: 63,882 allocs, 54,505 frees, 1,356,160,504 bytes allocated ==806898== ==806898== LEAK SUMMARY: ==806898== definitely lost: 0 bytes in 0 blocks ==806898== indirectly lost: 0 bytes in 0 blocks ==806898== possibly lost: 0 bytes in 0 blocks ==806898== still reachable: 24 bytes in 2 blocks ==806898== suppressed: 700,266 bytes in 9,375 blocks ==806898== Reachable blocks (those to which a pointer was found) are not shown. ==806898== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==806898== ==806898== For lists of detected and suppressed errors, rerun with: -s ==806898== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)