==826958== Memcheck, a memory error detector ==826958== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==826958== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==826958== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==826958== Parent PID: 806642 ==826958== ==826958== ==826958== FILE DESCRIPTORS: 9 open (3 std) at exit. ==826958== Open file descriptor 12: ==826958== at 0x105E722D: pipe (pipe.c:29) ==826958== by 0x1A7C307D: ??? ==826958== by 0x159D24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==826958== by 0x12271418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==826958== by 0x1220AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==826958== by 0x10F01D38: PetscInitialize (pinit.c:924) ==826958== by 0xFDC171D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==826958== by 0xFDC176B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==826958== by 0x24501C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==826958== by 0x239B33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==826958== by 0x23E3D0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==826958== by 0x23E270: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==826958== by 0x23E907: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==826958== by 0x237E20: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==826958== ==826958== Open file descriptor 8: /dev/shm/open_mpi.0000 ==826958== at 0x105EBBCC: __open_nocancel (open64_nocancel.c:39) ==826958== by 0x1056FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==826958== by 0xFDF9822: ??? ==826958== by 0xFDF996F: ??? ==826958== by 0x15A776DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==826958== by 0x15A77938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==826958== by 0x15A2D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==826958== by 0x159D22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==826958== by 0x12271418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==826958== by 0x1220AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==826958== by 0x10F01D38: PetscInitialize (pinit.c:924) ==826958== by 0xFDC171D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==826958== by 0xFDC176B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==826958== by 0x24501C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==826958== by 0x239B33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==826958== by 0x23E3D0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==826958== by 0x23E270: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==826958== by 0x23E907: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==826958== by 0x237E20: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==826958== ==826958== Open file descriptor 114: ==826958== ==826958== ==826958== Open file descriptor 110: ==826958== ==826958== ==826958== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==826958== ==826958== ==826958== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==826958== ==826958== ==826958== ==826958== HEAP SUMMARY: ==826958== in use at exit: 700,718 bytes in 9,374 blocks ==826958== total heap usage: 6,298,905 allocs, 6,289,531 frees, 2,068,207,561 bytes allocated ==826958== ==826958== LEAK SUMMARY: ==826958== definitely lost: 0 bytes in 0 blocks ==826958== indirectly lost: 0 bytes in 0 blocks ==826958== possibly lost: 0 bytes in 0 blocks ==826958== still reachable: 56 bytes in 3 blocks ==826958== suppressed: 700,662 bytes in 9,371 blocks ==826958== Reachable blocks (those to which a pointer was found) are not shown. ==826958== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==826958== ==826958== For lists of detected and suppressed errors, rerun with: -s ==826958== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)