==827005== Memcheck, a memory error detector ==827005== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==827005== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==827005== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==827005== Parent PID: 806642 ==827005== ==827005== ==827005== FILE DESCRIPTORS: 9 open (3 std) at exit. ==827005== Open file descriptor 12: ==827005== at 0x119B522D: pipe (pipe.c:29) ==827005== by 0x1A7C307D: ??? ==827005== by 0x159254CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==827005== by 0x112BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==827005== by 0x11258D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==827005== by 0xFF4FD38: PetscInitialize (pinit.c:924) ==827005== by 0xFDC171D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==827005== by 0xFDC176B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==827005== by 0x22E041: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==827005== by 0x224153: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==827005== by 0x227EC6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==827005== by 0x227D66: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==827005== by 0x2283FD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==827005== by 0x222440: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==827005== ==827005== Open file descriptor 8: /dev/shm/open_mpi.0000 ==827005== at 0x119B9BCC: __open_nocancel (open64_nocancel.c:39) ==827005== by 0x1193DC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==827005== by 0xFDF9822: ??? ==827005== by 0xFDF996F: ??? ==827005== by 0x159CA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==827005== by 0x159CA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==827005== by 0x15980922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==827005== by 0x159252DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==827005== by 0x112BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==827005== by 0x11258D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==827005== by 0xFF4FD38: PetscInitialize (pinit.c:924) ==827005== by 0xFDC171D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==827005== by 0xFDC176B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==827005== by 0x22E041: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==827005== by 0x224153: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==827005== by 0x227EC6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==827005== by 0x227D66: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==827005== by 0x2283FD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==827005== by 0x222440: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==827005== ==827005== Open file descriptor 114: ==827005== ==827005== ==827005== Open file descriptor 110: ==827005== ==827005== ==827005== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithVertexBasedCellPopulation_valgrind.txt ==827005== ==827005== ==827005== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==827005== ==827005== ==827005== ==827005== HEAP SUMMARY: ==827005== in use at exit: 700,718 bytes in 9,374 blocks ==827005== total heap usage: 3,709,861 allocs, 3,700,487 frees, 1,633,389,705 bytes allocated ==827005== ==827005== LEAK SUMMARY: ==827005== definitely lost: 0 bytes in 0 blocks ==827005== indirectly lost: 0 bytes in 0 blocks ==827005== possibly lost: 0 bytes in 0 blocks ==827005== still reachable: 56 bytes in 3 blocks ==827005== suppressed: 700,662 bytes in 9,371 blocks ==827005== Reachable blocks (those to which a pointer was found) are not shown. ==827005== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==827005== ==827005== For lists of detected and suppressed errors, rerun with: -s ==827005== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)