==824935== Memcheck, a memory error detector ==824935== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==824935== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==824935== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningTumourSpheroidSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==824935== Parent PID: 806642 ==824935== ==824935== ==824935== FILE DESCRIPTORS: 9 open (3 std) at exit. ==824935== Open file descriptor 12: ==824935== at 0xEF9722D: pipe (pipe.c:29) ==824935== by 0x18AEF07D: ??? ==824935== by 0x140F24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==824935== by 0x108B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==824935== by 0x10852D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==824935== by 0xF547D38: PetscInitialize (pinit.c:924) ==824935== by 0xE89C71D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==824935== by 0xE89C76B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==824935== by 0x126384: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==824935== by 0x12057D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==824935== by 0x122A3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==824935== by 0x122938: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==824935== by 0x122F4B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==824935== by 0x11ED80: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==824935== ==824935== Open file descriptor 8: /dev/shm/open_mpi.0000 ==824935== at 0xEF9BBCC: __open_nocancel (open64_nocancel.c:39) ==824935== by 0xEF1FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==824935== by 0xE8D4822: ??? ==824935== by 0xE8D496F: ??? ==824935== by 0x141976DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==824935== by 0x14197938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==824935== by 0x1414D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==824935== by 0x140F22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==824935== by 0x108B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==824935== by 0x10852D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==824935== by 0xF547D38: PetscInitialize (pinit.c:924) ==824935== by 0xE89C71D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==824935== by 0xE89C76B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==824935== by 0x126384: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==824935== by 0x12057D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==824935== by 0x122A3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==824935== by 0x122938: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==824935== by 0x122F4B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==824935== by 0x11ED80: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==824935== ==824935== Open file descriptor 114: ==824935== ==824935== ==824935== Open file descriptor 110: ==824935== ==824935== ==824935== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningTumourSpheroidSimulationsTutorial_valgrind.txt ==824935== ==824935== ==824935== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==824935== ==824935== ==824935== ==824935== HEAP SUMMARY: ==824935== in use at exit: 700,770 bytes in 9,378 blocks ==824935== total heap usage: 2,084,388 allocs, 2,075,010 frees, 1,689,108,427 bytes allocated ==824935== ==824935== LEAK SUMMARY: ==824935== definitely lost: 0 bytes in 0 blocks ==824935== indirectly lost: 0 bytes in 0 blocks ==824935== possibly lost: 0 bytes in 0 blocks ==824935== still reachable: 56 bytes in 3 blocks ==824935== suppressed: 700,714 bytes in 9,375 blocks ==824935== Reachable blocks (those to which a pointer was found) are not shown. ==824935== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==824935== ==824935== For lists of detected and suppressed errors, rerun with: -s ==824935== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)