==933167== Memcheck, a memory error detector ==933167== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==933167== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==933167== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info ==933167== Parent PID: 931175 ==933167== ==933167== ==933167== FILE DESCRIPTORS: 9 open (3 std) at exit. ==933167== Open file descriptor 12: ==933167== at 0xEBB922D: pipe (pipe.c:29) ==933167== by 0x18A6F07D: ??? ==933167== by 0x1407F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==933167== by 0x10858418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==933167== by 0x107F1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==933167== by 0xF4E8D38: PetscInitialize (pinit.c:924) ==933167== by 0xE4C11E9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==933167== by 0xE4C1237: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==933167== by 0x122316: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==933167== by 0x11DA85: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==933167== by 0x11FE74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==933167== by 0x11FD14: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==933167== by 0x1203AB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==933167== by 0x11BDB5: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==933167== ==933167== Open file descriptor 8: /dev/shm/open_mpi.0000 ==933167== at 0xEBBDBCC: __open_nocancel (open64_nocancel.c:39) ==933167== by 0xEB41C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==933167== by 0xE4F6822: ??? ==933167== by 0xE4F696F: ??? ==933167== by 0x141246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==933167== by 0x14124938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==933167== by 0x140DA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==933167== by 0x1407F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==933167== by 0x10858418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==933167== by 0x107F1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==933167== by 0xF4E8D38: PetscInitialize (pinit.c:924) ==933167== by 0xE4C11E9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==933167== by 0xE4C1237: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==933167== by 0x122316: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==933167== by 0x11DA85: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==933167== by 0x11FE74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==933167== by 0x11FD14: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==933167== by 0x1203AB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==933167== by 0x11BDB5: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==933167== ==933167== Open file descriptor 114: ==933167== ==933167== ==933167== Open file descriptor 110: ==933167== ==933167== ==933167== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt ==933167== ==933167== ==933167== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==933167== ==933167== ==933167== ==933167== HEAP SUMMARY: ==933167== in use at exit: 700,754 bytes in 9,378 blocks ==933167== total heap usage: 1,126,597 allocs, 1,117,219 frees, 1,431,042,149 bytes allocated ==933167== ==933167== LEAK SUMMARY: ==933167== definitely lost: 0 bytes in 0 blocks ==933167== indirectly lost: 0 bytes in 0 blocks ==933167== possibly lost: 0 bytes in 0 blocks ==933167== still reachable: 56 bytes in 3 blocks ==933167== suppressed: 700,698 bytes in 9,375 blocks ==933167== Reachable blocks (those to which a pointer was found) are not shown. ==933167== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==933167== ==933167== For lists of detected and suppressed errors, rerun with: -s ==933167== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 40 from 40)