==951493== Memcheck, a memory error detector ==951493== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==951493== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==951493== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==951493== Parent PID: 931175 ==951493== ==951493== ==951493== FILE DESCRIPTORS: 9 open (3 std) at exit. ==951493== Open file descriptor 12: ==951493== at 0x105A422D: pipe (pipe.c:29) ==951493== by 0x1A73207D: ??? ==951493== by 0x159324CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==951493== by 0x121FF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==951493== by 0x12198D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==951493== by 0x10E8FD38: PetscInitialize (pinit.c:924) ==951493== by 0xFD811E9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==951493== by 0xFD81237: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==951493== by 0x23B7F2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==951493== by 0x2319C9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==951493== by 0x2360FA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==951493== by 0x235F9A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==951493== by 0x236631: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==951493== by 0x22FCB5: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==951493== ==951493== Open file descriptor 8: /dev/shm/open_mpi.0000 ==951493== at 0x105A8BCC: __open_nocancel (open64_nocancel.c:39) ==951493== by 0x1052CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==951493== by 0xFDB6822: ??? ==951493== by 0xFDB696F: ??? ==951493== by 0x159D76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==951493== by 0x159D7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==951493== by 0x1598D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==951493== by 0x159322DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==951493== by 0x121FF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==951493== by 0x12198D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==951493== by 0x10E8FD38: PetscInitialize (pinit.c:924) ==951493== by 0xFD811E9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==951493== by 0xFD81237: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==951493== by 0x23B7F2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==951493== by 0x2319C9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==951493== by 0x2360FA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==951493== by 0x235F9A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==951493== by 0x236631: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==951493== by 0x22FCB5: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==951493== ==951493== Open file descriptor 114: ==951493== ==951493== ==951493== Open file descriptor 110: ==951493== ==951493== ==951493== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==951493== ==951493== ==951493== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==951493== ==951493== ==951493== ==951493== HEAP SUMMARY: ==951493== in use at exit: 700,702 bytes in 9,374 blocks ==951493== total heap usage: 6,309,955 allocs, 6,300,581 frees, 2,072,853,428 bytes allocated ==951493== ==951493== LEAK SUMMARY: ==951493== definitely lost: 0 bytes in 0 blocks ==951493== indirectly lost: 0 bytes in 0 blocks ==951493== possibly lost: 0 bytes in 0 blocks ==951493== still reachable: 56 bytes in 3 blocks ==951493== suppressed: 700,646 bytes in 9,371 blocks ==951493== Reachable blocks (those to which a pointer was found) are not shown. ==951493== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==951493== ==951493== For lists of detected and suppressed errors, rerun with: -s ==951493== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)