==951538== Memcheck, a memory error detector ==951538== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==951538== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==951538== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==951538== Parent PID: 931175 ==951538== ==951538== ==951538== FILE DESCRIPTORS: 9 open (3 std) at exit. ==951538== Open file descriptor 12: ==951538== at 0x1197222D: pipe (pipe.c:29) ==951538== by 0x1A73007D: ??? ==951538== by 0x158944CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==951538== by 0x1127C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==951538== by 0x11215D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==951538== by 0xFF0CD38: PetscInitialize (pinit.c:924) ==951538== by 0xFD811E9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==951538== by 0xFD81237: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==951538== by 0x224817: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==951538== by 0x21BFE9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==951538== by 0x21FBF0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==951538== by 0x21FA90: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==951538== by 0x220127: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==951538== by 0x21A2D5: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==951538== ==951538== Open file descriptor 8: /dev/shm/open_mpi.0000 ==951538== at 0x11976BCC: __open_nocancel (open64_nocancel.c:39) ==951538== by 0x118FAC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==951538== by 0xFDB6822: ??? ==951538== by 0xFDB696F: ??? ==951538== by 0x159396DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==951538== by 0x15939938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==951538== by 0x158EF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==951538== by 0x158942DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==951538== by 0x1127C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==951538== by 0x11215D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==951538== by 0xFF0CD38: PetscInitialize (pinit.c:924) ==951538== by 0xFD811E9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==951538== by 0xFD81237: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==951538== by 0x224817: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==951538== by 0x21BFE9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==951538== by 0x21FBF0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==951538== by 0x21FA90: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==951538== by 0x220127: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==951538== by 0x21A2D5: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==951538== ==951538== Open file descriptor 114: ==951538== ==951538== ==951538== Open file descriptor 110: ==951538== ==951538== ==951538== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithVertexBasedCellPopulation_valgrind.txt ==951538== ==951538== ==951538== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==951538== ==951538== ==951538== ==951538== HEAP SUMMARY: ==951538== in use at exit: 700,702 bytes in 9,374 blocks ==951538== total heap usage: 3,719,601 allocs, 3,710,227 frees, 1,636,744,059 bytes allocated ==951538== ==951538== LEAK SUMMARY: ==951538== definitely lost: 0 bytes in 0 blocks ==951538== indirectly lost: 0 bytes in 0 blocks ==951538== possibly lost: 0 bytes in 0 blocks ==951538== still reachable: 56 bytes in 3 blocks ==951538== suppressed: 700,646 bytes in 9,371 blocks ==951538== Reachable blocks (those to which a pointer was found) are not shown. ==951538== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==951538== ==951538== For lists of detected and suppressed errors, rerun with: -s ==951538== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)