==951234== Memcheck, a memory error detector ==951234== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==951234== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==951234== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOdeBasedCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==951234== Parent PID: 931175 ==951234== ==951234== ==951234== FILE DESCRIPTORS: 9 open (3 std) at exit. ==951234== Open file descriptor 12: ==951234== at 0x102FD22D: pipe (pipe.c:29) ==951234== by 0x1A73107D: ??? ==951234== by 0x148D24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==951234== by 0xFC07418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==951234== by 0xFBA0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==951234== by 0xE897D38: PetscInitialize (pinit.c:924) ==951234== by 0xE70C1E9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==951234== by 0xE70C237: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==951234== by 0x193453: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==951234== by 0x18B18B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==951234== by 0x18E788: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==951234== by 0x18E628: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==951234== by 0x18ECBF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==951234== by 0x186F75: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==951234== ==951234== Open file descriptor 8: /dev/shm/open_mpi.0000 ==951234== at 0x10301BCC: __open_nocancel (open64_nocancel.c:39) ==951234== by 0x10285C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==951234== by 0xE741822: ??? ==951234== by 0xE74196F: ??? ==951234== by 0x149776DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==951234== by 0x14977938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==951234== by 0x1492D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==951234== by 0x148D22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==951234== by 0xFC07418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==951234== by 0xFBA0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==951234== by 0xE897D38: PetscInitialize (pinit.c:924) ==951234== by 0xE70C1E9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==951234== by 0xE70C237: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==951234== by 0x193453: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==951234== by 0x18B18B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==951234== by 0x18E788: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==951234== by 0x18E628: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==951234== by 0x18ECBF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==951234== by 0x186F75: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==951234== ==951234== Open file descriptor 114: ==951234== ==951234== ==951234== Open file descriptor 110: ==951234== ==951234== ==951234== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModelsForCrypt_valgrind.txt ==951234== ==951234== ==951234== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==951234== ==951234== ==951234== ==951234== HEAP SUMMARY: ==951234== in use at exit: 700,834 bytes in 9,379 blocks ==951234== total heap usage: 863,793 allocs, 854,414 frees, 1,475,951,208 bytes allocated ==951234== ==951234== LEAK SUMMARY: ==951234== definitely lost: 0 bytes in 0 blocks ==951234== indirectly lost: 0 bytes in 0 blocks ==951234== possibly lost: 0 bytes in 0 blocks ==951234== still reachable: 120 bytes in 4 blocks ==951234== suppressed: 700,714 bytes in 9,375 blocks ==951234== Reachable blocks (those to which a pointer was found) are not shown. ==951234== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==951234== ==951234== For lists of detected and suppressed errors, rerun with: -s ==951234== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)