==933597== Memcheck, a memory error detector ==933597== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==933597== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==933597== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==933597== Parent PID: 931175 ==933597== ==933597== ==933597== FILE DESCRIPTORS: 9 open (3 std) at exit. ==933597== Open file descriptor 12: ==933597== at 0xF08022D: pipe (pipe.c:29) ==933597== by 0x18A6E07D: ??? ==933597== by 0x1407C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==933597== by 0x1093F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==933597== by 0x108D8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==933597== by 0xF5CFD38: PetscInitialize (pinit.c:924) ==933597== by 0xE85D1E9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==933597== by 0xE85D237: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==933597== by 0x22567C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==933597== by 0x21ECFF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==933597== by 0x22286A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==933597== by 0x22270A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==933597== by 0x222DA1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==933597== by 0x21CFB5: main (TestOffLatticeSimulationWithPdes.cpp:19) ==933597== ==933597== Open file descriptor 8: /dev/shm/open_mpi.0000 ==933597== at 0xF084BCC: __open_nocancel (open64_nocancel.c:39) ==933597== by 0xF008C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==933597== by 0xE892822: ??? ==933597== by 0xE89296F: ??? ==933597== by 0x141216DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==933597== by 0x14121938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==933597== by 0x140D7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==933597== by 0x1407C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==933597== by 0x1093F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==933597== by 0x108D8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==933597== by 0xF5CFD38: PetscInitialize (pinit.c:924) ==933597== by 0xE85D1E9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==933597== by 0xE85D237: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==933597== by 0x22567C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==933597== by 0x21ECFF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==933597== by 0x22286A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==933597== by 0x22270A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==933597== by 0x222DA1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==933597== by 0x21CFB5: main (TestOffLatticeSimulationWithPdes.cpp:19) ==933597== ==933597== Open file descriptor 114: ==933597== ==933597== ==933597== Open file descriptor 110: ==933597== ==933597== ==933597== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==933597== ==933597== ==933597== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==933597== ==933597== ==933597== ==933597== HEAP SUMMARY: ==933597== in use at exit: 700,686 bytes in 9,374 blocks ==933597== total heap usage: 7,509,613 allocs, 7,500,239 frees, 2,662,359,126 bytes allocated ==933597== ==933597== LEAK SUMMARY: ==933597== definitely lost: 0 bytes in 0 blocks ==933597== indirectly lost: 0 bytes in 0 blocks ==933597== possibly lost: 0 bytes in 0 blocks ==933597== still reachable: 56 bytes in 3 blocks ==933597== suppressed: 700,630 bytes in 9,371 blocks ==933597== Reachable blocks (those to which a pointer was found) are not shown. ==933597== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==933597== ==933597== For lists of detected and suppressed errors, rerun with: -s ==933597== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)