==933171== Memcheck, a memory error detector ==933171== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==933171== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==933171== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==933171== Parent PID: 931175 ==933171== ==933171== ==933171== FILE DESCRIPTORS: 9 open (3 std) at exit. ==933171== Open file descriptor 12: ==933171== at 0xECE422D: pipe (pipe.c:29) ==933171== by 0x18A6F07D: ??? ==933171== by 0x1407F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==933171== by 0x1093F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==933171== by 0x108D8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==933171== by 0xF5CFD38: PetscInitialize (pinit.c:924) ==933171== by 0xE4C11E9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==933171== by 0xE4C1237: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==933171== by 0x31197C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==933171== by 0x307C69: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==933171== by 0x30C070: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==933171== by 0x30BF10: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==933171== by 0x30C5A7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==933171== by 0x305F55: main (TestOffLatticeSimulation.cpp:19) ==933171== ==933171== Open file descriptor 8: /dev/shm/open_mpi.0000 ==933171== at 0xECE8BCC: __open_nocancel (open64_nocancel.c:39) ==933171== by 0xEC6CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==933171== by 0xE4F6822: ??? ==933171== by 0xE4F696F: ??? ==933171== by 0x141246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==933171== by 0x14124938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==933171== by 0x140DA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==933171== by 0x1407F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==933171== by 0x1093F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==933171== by 0x108D8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==933171== by 0xF5CFD38: PetscInitialize (pinit.c:924) ==933171== by 0xE4C11E9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==933171== by 0xE4C1237: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==933171== by 0x31197C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==933171== by 0x307C69: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==933171== by 0x30C070: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==933171== by 0x30BF10: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==933171== by 0x30C5A7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==933171== by 0x305F55: main (TestOffLatticeSimulation.cpp:19) ==933171== ==933171== Open file descriptor 114: ==933171== ==933171== ==933171== Open file descriptor 110: ==933171== ==933171== ==933171== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==933171== ==933171== ==933171== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==933171== ==933171== ==933171== ==933171== HEAP SUMMARY: ==933171== in use at exit: 700,686 bytes in 9,374 blocks ==933171== total heap usage: 12,851,405 allocs, 12,842,031 frees, 3,876,899,108 bytes allocated ==933171== ==933171== LEAK SUMMARY: ==933171== definitely lost: 0 bytes in 0 blocks ==933171== indirectly lost: 0 bytes in 0 blocks ==933171== possibly lost: 0 bytes in 0 blocks ==933171== still reachable: 56 bytes in 3 blocks ==933171== suppressed: 700,630 bytes in 9,371 blocks ==933171== Reachable blocks (those to which a pointer was found) are not shown. ==933171== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==933171== ==933171== For lists of detected and suppressed errors, rerun with: -s ==933171== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)