==936922== Memcheck, a memory error detector ==936922== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==936922== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==936922== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==936922== Parent PID: 931175 ==936922== ==936922== ==936922== FILE DESCRIPTORS: 9 open (3 std) at exit. ==936922== Open file descriptor 12: ==936922== at 0xF03E22D: pipe (pipe.c:29) ==936922== by 0x18A6E07D: ??? ==936922== by 0x1407C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==936922== by 0x1093F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==936922== by 0x108D8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==936922== by 0xF5CFD38: PetscInitialize (pinit.c:924) ==936922== by 0xE85D1E9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==936922== by 0xE85D237: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==936922== by 0x13596A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==936922== by 0x1304FB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==936922== by 0x133180: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==936922== by 0x133020: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==936922== by 0x1336B7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==936922== by 0x12E7F5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==936922== ==936922== Open file descriptor 8: /dev/shm/open_mpi.0000 ==936922== at 0xF042BCC: __open_nocancel (open64_nocancel.c:39) ==936922== by 0xEFC6C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==936922== by 0xE892822: ??? ==936922== by 0xE89296F: ??? ==936922== by 0x141216DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==936922== by 0x14121938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==936922== by 0x140D7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==936922== by 0x1407C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==936922== by 0x1093F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==936922== by 0x108D8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==936922== by 0xF5CFD38: PetscInitialize (pinit.c:924) ==936922== by 0xE85D1E9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==936922== by 0xE85D237: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==936922== by 0x13596A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==936922== by 0x1304FB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==936922== by 0x133180: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==936922== by 0x133020: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==936922== by 0x1336B7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==936922== by 0x12E7F5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==936922== ==936922== Open file descriptor 114: ==936922== ==936922== ==936922== Open file descriptor 110: ==936922== ==936922== ==936922== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==936922== ==936922== ==936922== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==936922== ==936922== ==936922== ==936922== HEAP SUMMARY: ==936922== in use at exit: 700,754 bytes in 9,378 blocks ==936922== total heap usage: 2,374,222 allocs, 2,364,844 frees, 1,794,528,710 bytes allocated ==936922== ==936922== LEAK SUMMARY: ==936922== definitely lost: 0 bytes in 0 blocks ==936922== indirectly lost: 0 bytes in 0 blocks ==936922== possibly lost: 0 bytes in 0 blocks ==936922== still reachable: 56 bytes in 3 blocks ==936922== suppressed: 700,698 bytes in 9,375 blocks ==936922== Reachable blocks (those to which a pointer was found) are not shown. ==936922== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==936922== ==936922== For lists of detected and suppressed errors, rerun with: -s ==936922== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)