==932964== Memcheck, a memory error detector ==932964== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==932964== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==932964== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPeriodicNodeBasedCellPopulationParallelMethods -malloc_debug -malloc_dump -memory_info ==932964== Parent PID: 931175 ==932964== ==932964== ==932964== FILE DESCRIPTORS: 9 open (3 std) at exit. ==932964== Open file descriptor 12: ==932964== at 0xECA022D: pipe (pipe.c:29) ==932964== by 0x18A6F07D: ??? ==932964== by 0x1407F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==932964== by 0x1093F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==932964== by 0x108D8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==932964== by 0xF5CFD38: PetscInitialize (pinit.c:924) ==932964== by 0xE4C11E9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==932964== by 0xE4C1237: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==932964== by 0x12B4EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==932964== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==932964== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==932964== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==932964== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==932964== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==932964== ==932964== Open file descriptor 8: /dev/shm/open_mpi.0000 ==932964== at 0xECA4BCC: __open_nocancel (open64_nocancel.c:39) ==932964== by 0xEC28C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==932964== by 0xE4F6822: ??? ==932964== by 0xE4F696F: ??? ==932964== by 0x141246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==932964== by 0x14124938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==932964== by 0x140DA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==932964== by 0x1407F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==932964== by 0x1093F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==932964== by 0x108D8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==932964== by 0xF5CFD38: PetscInitialize (pinit.c:924) ==932964== by 0xE4C11E9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==932964== by 0xE4C1237: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==932964== by 0x12B4EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==932964== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==932964== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==932964== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==932964== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==932964== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==932964== ==932964== Open file descriptor 114: ==932964== ==932964== ==932964== Open file descriptor 110: ==932964== ==932964== ==932964== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPeriodicNodeBasedCellPopulationParallelMethods_valgrind.txt ==932964== ==932964== ==932964== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==932964== ==932964== ==932964== ==932964== HEAP SUMMARY: ==932964== in use at exit: 700,754 bytes in 9,378 blocks ==932964== total heap usage: 54,854 allocs, 45,476 frees, 1,353,939,378 bytes allocated ==932964== ==932964== LEAK SUMMARY: ==932964== definitely lost: 0 bytes in 0 blocks ==932964== indirectly lost: 0 bytes in 0 blocks ==932964== possibly lost: 0 bytes in 0 blocks ==932964== still reachable: 56 bytes in 3 blocks ==932964== suppressed: 700,698 bytes in 9,375 blocks ==932964== Reachable blocks (those to which a pointer was found) are not shown. ==932964== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==932964== ==932964== For lists of detected and suppressed errors, rerun with: -s ==932964== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)