==945579== Memcheck, a memory error detector ==945579== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==945579== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==945579== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningDeltaNotchSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==945579== Parent PID: 931175 ==945579== ==945579== ==945579== FILE DESCRIPTORS: 9 open (3 std) at exit. ==945579== Open file descriptor 12: ==945579== at 0xEBB922D: pipe (pipe.c:29) ==945579== by 0x18A6F07D: ??? ==945579== by 0x1407F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==945579== by 0x10858418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==945579== by 0x107F1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==945579== by 0xF4E8D38: PetscInitialize (pinit.c:924) ==945579== by 0xE4C11E9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==945579== by 0xE4C1237: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==945579== by 0x121D08: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==945579== by 0x11D573: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==945579== by 0x11F890: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==945579== by 0x11F78B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==945579== by 0x11FD9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==945579== by 0x11BD75: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==945579== ==945579== Open file descriptor 8: /dev/shm/open_mpi.0000 ==945579== at 0xEBBDBCC: __open_nocancel (open64_nocancel.c:39) ==945579== by 0xEB41C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==945579== by 0xE4F6822: ??? ==945579== by 0xE4F696F: ??? ==945579== by 0x141246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==945579== by 0x14124938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==945579== by 0x140DA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==945579== by 0x1407F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==945579== by 0x10858418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==945579== by 0x107F1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==945579== by 0xF4E8D38: PetscInitialize (pinit.c:924) ==945579== by 0xE4C11E9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==945579== by 0xE4C1237: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==945579== by 0x121D08: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==945579== by 0x11D573: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==945579== by 0x11F890: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==945579== by 0x11F78B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==945579== by 0x11FD9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==945579== by 0x11BD75: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==945579== ==945579== Open file descriptor 114: ==945579== ==945579== ==945579== Open file descriptor 110: ==945579== ==945579== ==945579== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningDeltaNotchSimulationsTutorial_valgrind.txt ==945579== ==945579== ==945579== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==945579== ==945579== ==945579== ==945579== HEAP SUMMARY: ==945579== in use at exit: 700,686 bytes in 9,374 blocks ==945579== total heap usage: 5,178,274 allocs, 5,168,900 frees, 1,793,359,516 bytes allocated ==945579== ==945579== LEAK SUMMARY: ==945579== definitely lost: 0 bytes in 0 blocks ==945579== indirectly lost: 0 bytes in 0 blocks ==945579== possibly lost: 0 bytes in 0 blocks ==945579== still reachable: 56 bytes in 3 blocks ==945579== suppressed: 700,630 bytes in 9,371 blocks ==945579== Reachable blocks (those to which a pointer was found) are not shown. ==945579== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==945579== ==945579== For lists of detected and suppressed errors, rerun with: -s ==945579== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)