==994403== Memcheck, a memory error detector ==994403== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==994403== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==994403== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info ==994403== Parent PID: 992400 ==994403== ==994403== ==994403== FILE DESCRIPTORS: 9 open (3 std) at exit. ==994403== Open file descriptor 12: ==994403== at 0xEBEB22D: pipe (pipe.c:29) ==994403== by 0x18AF307D: ??? ==994403== by 0x140F84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==994403== by 0x108BA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==994403== by 0x10853D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==994403== by 0xF54AD38: PetscInitialize (pinit.c:924) ==994403== by 0xE4F0801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==994403== by 0xE4F084F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==994403== by 0x12CC48: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==994403== by 0x126C8F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==994403== by 0x129252: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==994403== by 0x1290F3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==994403== by 0x129789: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==994403== by 0x124FC0: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==994403== ==994403== Open file descriptor 8: /dev/shm/open_mpi.0000 ==994403== at 0xEBEFBCC: __open_nocancel (open64_nocancel.c:39) ==994403== by 0xEB73C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==994403== by 0xE528822: ??? ==994403== by 0xE52896F: ??? ==994403== by 0x1419D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==994403== by 0x1419D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==994403== by 0x14153922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==994403== by 0x140F82DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==994403== by 0x108BA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==994403== by 0x10853D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==994403== by 0xF54AD38: PetscInitialize (pinit.c:924) ==994403== by 0xE4F0801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==994403== by 0xE4F084F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==994403== by 0x12CC48: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==994403== by 0x126C8F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==994403== by 0x129252: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==994403== by 0x1290F3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==994403== by 0x129789: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==994403== by 0x124FC0: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==994403== ==994403== Open file descriptor 114: ==994403== ==994403== ==994403== Open file descriptor 110: ==994403== ==994403== ==994403== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt ==994403== ==994403== ==994403== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==994403== ==994403== ==994403== ==994403== HEAP SUMMARY: ==994403== in use at exit: 700,770 bytes in 9,378 blocks ==994403== total heap usage: 1,126,050 allocs, 1,116,672 frees, 1,430,874,348 bytes allocated ==994403== ==994403== LEAK SUMMARY: ==994403== definitely lost: 0 bytes in 0 blocks ==994403== indirectly lost: 0 bytes in 0 blocks ==994403== possibly lost: 0 bytes in 0 blocks ==994403== still reachable: 56 bytes in 3 blocks ==994403== suppressed: 700,714 bytes in 9,375 blocks ==994403== Reachable blocks (those to which a pointer was found) are not shown. ==994403== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==994403== ==994403== For lists of detected and suppressed errors, rerun with: -s ==994403== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)