==1001993== Memcheck, a memory error detector ==1001993== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1001993== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1001993== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellCycleModelTutorial -malloc_debug -malloc_dump -memory_info ==1001993== Parent PID: 992400 ==1001993== ==1001993== ==1001993== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1001993== Open file descriptor 12: ==1001993== at 0x101CB22D: pipe (pipe.c:29) ==1001993== by 0x18AF107D: ??? ==1001993== by 0x140564CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1001993== by 0xF9EE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1001993== by 0xF987D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1001993== by 0xE67ED38: PetscInitialize (pinit.c:924) ==1001993== by 0xE4F0801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1001993== by 0xE4F084F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1001993== by 0x22FC9F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1001993== by 0x227FF7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1001993== by 0x22BA18: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1001993== by 0x22B8B9: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1001993== by 0x22BF4F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1001993== by 0x223DE0: main (TestCreatingAndUsingANewCellCycleModelTutorial.cpp:19) ==1001993== ==1001993== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1001993== at 0x101CFBCC: __open_nocancel (open64_nocancel.c:39) ==1001993== by 0x10153C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1001993== by 0xE528822: ??? ==1001993== by 0xE52896F: ??? ==1001993== by 0x140FB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1001993== by 0x140FB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1001993== by 0x140B1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1001993== by 0x140562DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1001993== by 0xF9EE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1001993== by 0xF987D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1001993== by 0xE67ED38: PetscInitialize (pinit.c:924) ==1001993== by 0xE4F0801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1001993== by 0xE4F084F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1001993== by 0x22FC9F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1001993== by 0x227FF7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1001993== by 0x22BA18: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1001993== by 0x22B8B9: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1001993== by 0x22BF4F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1001993== by 0x223DE0: main (TestCreatingAndUsingANewCellCycleModelTutorial.cpp:19) ==1001993== ==1001993== Open file descriptor 114: ==1001993== ==1001993== ==1001993== Open file descriptor 110: ==1001993== ==1001993== ==1001993== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellCycleModelTutorial_valgrind.txt ==1001993== ==1001993== ==1001993== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1001993== ==1001993== ==1001993== ==1001993== HEAP SUMMARY: ==1001993== in use at exit: 700,704 bytes in 9,374 blocks ==1001993== total heap usage: 8,968,961 allocs, 8,959,587 frees, 2,194,841,204 bytes allocated ==1001993== ==1001993== LEAK SUMMARY: ==1001993== definitely lost: 0 bytes in 0 blocks ==1001993== indirectly lost: 0 bytes in 0 blocks ==1001993== possibly lost: 0 bytes in 0 blocks ==1001993== still reachable: 56 bytes in 3 blocks ==1001993== suppressed: 700,648 bytes in 9,371 blocks ==1001993== Reachable blocks (those to which a pointer was found) are not shown. ==1001993== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1001993== ==1001993== For lists of detected and suppressed errors, rerun with: -s ==1001993== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)