==994836== Memcheck, a memory error detector ==994836== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==994836== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==994836== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==994836== Parent PID: 992400 ==994836== ==994836== ==994836== FILE DESCRIPTORS: 9 open (3 std) at exit. ==994836== Open file descriptor 12: ==994836== at 0xF0C322D: pipe (pipe.c:29) ==994836== by 0x18AF107D: ??? ==994836== by 0x140F44CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==994836== by 0x109A1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==994836== by 0x1093AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==994836== by 0xF631D38: PetscInitialize (pinit.c:924) ==994836== by 0xE89D801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==994836== by 0xE89D84F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==994836== by 0x22FEA8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==994836== by 0x227E6B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==994836== by 0x22BB42: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==994836== by 0x22B9E2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==994836== by 0x22C079: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==994836== by 0x226120: main (TestOffLatticeSimulationWithPdes.cpp:19) ==994836== ==994836== Open file descriptor 8: /dev/shm/open_mpi.0000 ==994836== at 0xF0C7BCC: __open_nocancel (open64_nocancel.c:39) ==994836== by 0xF04BC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==994836== by 0xE8D5822: ??? ==994836== by 0xE8D596F: ??? ==994836== by 0x141996DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==994836== by 0x14199938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==994836== by 0x1414F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==994836== by 0x140F42DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==994836== by 0x109A1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==994836== by 0x1093AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==994836== by 0xF631D38: PetscInitialize (pinit.c:924) ==994836== by 0xE89D801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==994836== by 0xE89D84F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==994836== by 0x22FEA8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==994836== by 0x227E6B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==994836== by 0x22BB42: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==994836== by 0x22B9E2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==994836== by 0x22C079: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==994836== by 0x226120: main (TestOffLatticeSimulationWithPdes.cpp:19) ==994836== ==994836== Open file descriptor 114: ==994836== ==994836== ==994836== Open file descriptor 110: ==994836== ==994836== ==994836== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==994836== ==994836== ==994836== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==994836== ==994836== ==994836== ==994836== HEAP SUMMARY: ==994836== in use at exit: 700,702 bytes in 9,374 blocks ==994836== total heap usage: 7,438,978 allocs, 7,429,604 frees, 2,649,069,984 bytes allocated ==994836== ==994836== LEAK SUMMARY: ==994836== definitely lost: 0 bytes in 0 blocks ==994836== indirectly lost: 0 bytes in 0 blocks ==994836== possibly lost: 0 bytes in 0 blocks ==994836== still reachable: 56 bytes in 3 blocks ==994836== suppressed: 700,646 bytes in 9,371 blocks ==994836== Reachable blocks (those to which a pointer was found) are not shown. ==994836== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==994836== ==994836== For lists of detected and suppressed errors, rerun with: -s ==994836== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)