==994409== Memcheck, a memory error detector ==994409== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==994409== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==994409== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==994409== Parent PID: 992400 ==994409== ==994409== ==994409== FILE DESCRIPTORS: 9 open (3 std) at exit. ==994409== Open file descriptor 12: ==994409== at 0xED1622D: pipe (pipe.c:29) ==994409== by 0x18AF307D: ??? ==994409== by 0x140F44CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==994409== by 0x109A1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==994409== by 0x1093AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==994409== by 0xF631D38: PetscInitialize (pinit.c:924) ==994409== by 0xE4F0801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==994409== by 0xE4F084F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==994409== by 0x31B176: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==994409== by 0x30FDD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==994409== by 0x314346: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==994409== by 0x3141E6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==994409== by 0x31487D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==994409== by 0x30E0C0: main (TestOffLatticeSimulation.cpp:19) ==994409== ==994409== Open file descriptor 8: /dev/shm/open_mpi.0000 ==994409== at 0xED1ABCC: __open_nocancel (open64_nocancel.c:39) ==994409== by 0xEC9EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==994409== by 0xE528822: ??? ==994409== by 0xE52896F: ??? ==994409== by 0x141996DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==994409== by 0x14199938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==994409== by 0x1414F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==994409== by 0x140F42DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==994409== by 0x109A1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==994409== by 0x1093AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==994409== by 0xF631D38: PetscInitialize (pinit.c:924) ==994409== by 0xE4F0801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==994409== by 0xE4F084F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==994409== by 0x31B176: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==994409== by 0x30FDD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==994409== by 0x314346: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==994409== by 0x3141E6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==994409== by 0x31487D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==994409== by 0x30E0C0: main (TestOffLatticeSimulation.cpp:19) ==994409== ==994409== Open file descriptor 114: ==994409== ==994409== ==994409== Open file descriptor 110: ==994409== ==994409== ==994409== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==994409== ==994409== ==994409== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==994409== ==994409== ==994409== ==994409== HEAP SUMMARY: ==994409== in use at exit: 700,702 bytes in 9,374 blocks ==994409== total heap usage: 12,820,807 allocs, 12,811,433 frees, 3,863,498,185 bytes allocated ==994409== ==994409== LEAK SUMMARY: ==994409== definitely lost: 0 bytes in 0 blocks ==994409== indirectly lost: 0 bytes in 0 blocks ==994409== possibly lost: 0 bytes in 0 blocks ==994409== still reachable: 56 bytes in 3 blocks ==994409== suppressed: 700,646 bytes in 9,371 blocks ==994409== Reachable blocks (those to which a pointer was found) are not shown. ==994409== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==994409== ==994409== For lists of detected and suppressed errors, rerun with: -s ==994409== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)