==995169== Memcheck, a memory error detector ==995169== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==995169== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==995169== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==995169== Parent PID: 992400 ==995169== ==995169== ==995169== FILE DESCRIPTORS: 9 open (3 std) at exit. ==995169== Open file descriptor 12: ==995169== at 0xF19222D: pipe (pipe.c:29) ==995169== by 0x18AF007D: ??? ==995169== by 0x142194CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==995169== by 0x10E1D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==995169== by 0x10DB6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==995169== by 0xFAADD38: PetscInitialize (pinit.c:924) ==995169== by 0xE4F0801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==995169== by 0xE4F084F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==995169== by 0x1DCE3C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==995169== by 0x1D5113: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==995169== by 0x1D8A1A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==995169== by 0x1D88BA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==995169== by 0x1D8F51: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==995169== by 0x1D3400: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==995169== ==995169== Open file descriptor 8: /dev/shm/open_mpi.0000 ==995169== at 0xF196BCC: __open_nocancel (open64_nocancel.c:39) ==995169== by 0xF11AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==995169== by 0xE528822: ??? ==995169== by 0xE52896F: ??? ==995169== by 0x142BE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==995169== by 0x142BE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==995169== by 0x14274922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==995169== by 0x142192DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==995169== by 0x10E1D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==995169== by 0x10DB6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==995169== by 0xFAADD38: PetscInitialize (pinit.c:924) ==995169== by 0xE4F0801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==995169== by 0xE4F084F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==995169== by 0x1DCE3C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==995169== by 0x1D5113: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==995169== by 0x1D8A1A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==995169== by 0x1D88BA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==995169== by 0x1D8F51: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==995169== by 0x1D3400: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==995169== ==995169== Open file descriptor 114: ==995169== ==995169== ==995169== Open file descriptor 110: ==995169== ==995169== ==995169== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithCaBasedCellPopulation_valgrind.txt ==995169== ==995169== ==995169== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==995169== ==995169== ==995169== ==995169== HEAP SUMMARY: ==995169== in use at exit: 700,702 bytes in 9,374 blocks ==995169== total heap usage: 6,927,170 allocs, 6,917,796 frees, 8,040,075,749 bytes allocated ==995169== ==995169== LEAK SUMMARY: ==995169== definitely lost: 0 bytes in 0 blocks ==995169== indirectly lost: 0 bytes in 0 blocks ==995169== possibly lost: 0 bytes in 0 blocks ==995169== still reachable: 56 bytes in 3 blocks ==995169== suppressed: 700,646 bytes in 9,371 blocks ==995169== Reachable blocks (those to which a pointer was found) are not shown. ==995169== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==995169== ==995169== For lists of detected and suppressed errors, rerun with: -s ==995169== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)