==1007260== Memcheck, a memory error detector ==1007260== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1007260== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1007260== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningDeltaNotchSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1007260== Parent PID: 992400 ==1007260== ==1007260== ==1007260== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1007260== Open file descriptor 12: ==1007260== at 0xEBEB22D: pipe (pipe.c:29) ==1007260== by 0x18AF307D: ??? ==1007260== by 0x140F84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1007260== by 0x108BA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1007260== by 0x10853D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1007260== by 0xF54AD38: PetscInitialize (pinit.c:924) ==1007260== by 0xE4F0801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1007260== by 0xE4F084F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1007260== by 0x12C65A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1007260== by 0x12679D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1007260== by 0x128C8E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1007260== by 0x128B8A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1007260== by 0x12919D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1007260== by 0x124FA0: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==1007260== ==1007260== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1007260== at 0xEBEFBCC: __open_nocancel (open64_nocancel.c:39) ==1007260== by 0xEB73C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1007260== by 0xE528822: ??? ==1007260== by 0xE52896F: ??? ==1007260== by 0x1419D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1007260== by 0x1419D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1007260== by 0x14153922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1007260== by 0x140F82DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1007260== by 0x108BA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1007260== by 0x10853D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1007260== by 0xF54AD38: PetscInitialize (pinit.c:924) ==1007260== by 0xE4F0801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1007260== by 0xE4F084F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1007260== by 0x12C65A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1007260== by 0x12679D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1007260== by 0x128C8E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1007260== by 0x128B8A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1007260== by 0x12919D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1007260== by 0x124FA0: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==1007260== ==1007260== Open file descriptor 114: ==1007260== ==1007260== ==1007260== Open file descriptor 110: ==1007260== ==1007260== ==1007260== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningDeltaNotchSimulationsTutorial_valgrind.txt ==1007260== ==1007260== ==1007260== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1007260== ==1007260== ==1007260== ==1007260== HEAP SUMMARY: ==1007260== in use at exit: 700,704 bytes in 9,374 blocks ==1007260== total heap usage: 5,176,516 allocs, 5,167,142 frees, 1,792,584,354 bytes allocated ==1007260== ==1007260== LEAK SUMMARY: ==1007260== definitely lost: 0 bytes in 0 blocks ==1007260== indirectly lost: 0 bytes in 0 blocks ==1007260== possibly lost: 0 bytes in 0 blocks ==1007260== still reachable: 56 bytes in 3 blocks ==1007260== suppressed: 700,648 bytes in 9,371 blocks ==1007260== Reachable blocks (those to which a pointer was found) are not shown. ==1007260== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1007260== ==1007260== For lists of detected and suppressed errors, rerun with: -s ==1007260== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)