==1010777== Memcheck, a memory error detector ==1010777== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1010777== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1010777== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningTumourSpheroidSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1010777== Parent PID: 992400 ==1010777== ==1010777== ==1010777== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1010777== Open file descriptor 12: ==1010777== at 0xEF9822D: pipe (pipe.c:29) ==1010777== by 0x18AF107D: ??? ==1010777== by 0x140F44CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1010777== by 0x108BA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1010777== by 0x10853D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1010777== by 0xF548D38: PetscInitialize (pinit.c:924) ==1010777== by 0xE89D801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1010777== by 0xE89D84F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1010777== by 0x126384: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1010777== by 0x12057D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1010777== by 0x122A3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1010777== by 0x122938: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1010777== by 0x122F4B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1010777== by 0x11ED80: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==1010777== ==1010777== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1010777== at 0xEF9CBCC: __open_nocancel (open64_nocancel.c:39) ==1010777== by 0xEF20C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1010777== by 0xE8D5822: ??? ==1010777== by 0xE8D596F: ??? ==1010777== by 0x141996DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1010777== by 0x14199938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1010777== by 0x1414F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1010777== by 0x140F42DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1010777== by 0x108BA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1010777== by 0x10853D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1010777== by 0xF548D38: PetscInitialize (pinit.c:924) ==1010777== by 0xE89D801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1010777== by 0xE89D84F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1010777== by 0x126384: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1010777== by 0x12057D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1010777== by 0x122A3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1010777== by 0x122938: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1010777== by 0x122F4B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1010777== by 0x11ED80: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==1010777== ==1010777== Open file descriptor 114: ==1010777== ==1010777== ==1010777== Open file descriptor 110: ==1010777== ==1010777== ==1010777== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningTumourSpheroidSimulationsTutorial_valgrind.txt ==1010777== ==1010777== ==1010777== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1010777== ==1010777== ==1010777== ==1010777== HEAP SUMMARY: ==1010777== in use at exit: 700,775 bytes in 9,378 blocks ==1010777== total heap usage: 2,084,392 allocs, 2,075,014 frees, 1,689,109,096 bytes allocated ==1010777== ==1010777== LEAK SUMMARY: ==1010777== definitely lost: 0 bytes in 0 blocks ==1010777== indirectly lost: 0 bytes in 0 blocks ==1010777== possibly lost: 0 bytes in 0 blocks ==1010777== still reachable: 56 bytes in 3 blocks ==1010777== suppressed: 700,719 bytes in 9,375 blocks ==1010777== Reachable blocks (those to which a pointer was found) are not shown. ==1010777== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1010777== ==1010777== For lists of detected and suppressed errors, rerun with: -s ==1010777== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)