==993721== Memcheck, a memory error detector ==993721== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==993721== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==993721== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==993721== Parent PID: 992400 ==993721== ==993721== ==993721== FILE DESCRIPTORS: 9 open (3 std) at exit. ==993721== Open file descriptor 12: ==993721== at 0x1044F22D: pipe (pipe.c:29) ==993721== by 0x18AF107D: ??? ==993721== by 0x140564CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==993721== by 0xFD59418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==993721== by 0xFCF2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==993721== by 0xE9C9D38: PetscInitialize (pinit.c:924) ==993721== by 0xE89D801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==993721== by 0xE89D84F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==993721== by 0x132E2B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==993721== by 0x12CC7D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==993721== by 0x12F3C8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==993721== by 0x12F2C4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==993721== by 0x12F8D7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==993721== by 0x12B480: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==993721== ==993721== Open file descriptor 8: /dev/shm/open_mpi.0000 ==993721== at 0x10453BCC: __open_nocancel (open64_nocancel.c:39) ==993721== by 0x103D7C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==993721== by 0xFC53822: ??? ==993721== by 0xFC5396F: ??? ==993721== by 0x140FB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==993721== by 0x140FB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==993721== by 0x140B1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==993721== by 0x140562DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==993721== by 0xFD59418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==993721== by 0xFCF2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==993721== by 0xE9C9D38: PetscInitialize (pinit.c:924) ==993721== by 0xE89D801: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==993721== by 0xE89D84F: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==993721== by 0x132E2B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==993721== by 0x12CC7D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==993721== by 0x12F3C8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==993721== by 0x12F2C4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==993721== by 0x12F8D7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==993721== by 0x12B480: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==993721== ==993721== Open file descriptor 114: ==993721== ==993721== ==993721== Open file descriptor 110: ==993721== ==993721== ==993721== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticBoxDomainPdeModifier_valgrind.txt ==993721== ==993721== ==993721== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==993721== ==993721== ==993721== ==993721== HEAP SUMMARY: ==993721== in use at exit: 700,702 bytes in 9,374 blocks ==993721== total heap usage: 7,721,208 allocs, 7,711,834 frees, 2,195,664,919 bytes allocated ==993721== ==993721== LEAK SUMMARY: ==993721== definitely lost: 0 bytes in 0 blocks ==993721== indirectly lost: 0 bytes in 0 blocks ==993721== possibly lost: 0 bytes in 0 blocks ==993721== still reachable: 56 bytes in 3 blocks ==993721== suppressed: 700,646 bytes in 9,371 blocks ==993721== Reachable blocks (those to which a pointer was found) are not shown. ==993721== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==993721== ==993721== For lists of detected and suppressed errors, rerun with: -s ==993721== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)